Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g02941 ATGGCAACTGCGGCGGTGCTCCGTTCCATTCTCCGCCGCTCACGCTCTTCGCCACTCCTCCATCTGCCACGAGCCCTCACATCTCATCCCCTTCCCCCACTCCACTCTCCTTCAACACCTCACTCTCCAACCCCCGCCTCTCTCGACGCGTTCCGCACACGCGCTTTCTCAACTCACTCTTTCAACGACCGCGAATCGGAAACTGAAACGTTCGGTCTCGACTCACCGGTCCACTCCGAGATTCTGAAAGCAGTCGCAGACAGCGCCGGTGCCGGCGGCGAAGATAGCCCTGTTTTCCCCATCCGTGCGGTGATTTCCATCCTTGAATCATACCACGATCTTACTGGATTTCCATGGTGGATAACTATAGTTTCCTCTACTTTCGCTCTCAGAATTGTAATGCTTTTTCCTCTTGTTTTTACACTTCACAAGCTTAAAAGGATTGCAGAGTTTGCACCTAAATTGCCCCCTCCATTCCCACCACCTTTCTCAGGAAAGAGTTATATGCGACAGATGTCATTCTTCGAGGAGAAGAGAAAAGCAATTGGATGCCCTTCATATGCATGGCCACTAGTACCATTTATGGTTCAGATTCCCTGCTTTTTCTTGTGGATGATTAGCATAAGGAGGATGTCACTGGATGATCACCCTGGTTTTGATTGTGGCGGTGCTTTATGGTTTCAGAATTTAAGTGAATTCTCTCACGGTTATTCTGGGTTCACCTTTCCTTTTCTGATGGCTAGTTTGCACTACATTATTGTTCAGGTATCCTTTAAGAAACCTTTGGTTGAAGAAACGAAGGACATTTTTGGCTTGTTATCCACTTACTACAAGCGATACTTGGACTTTCTAACACTGCCTATAGCTTTCATTGGCTTTTGTATTCCTCAGGGAAGCCAACTCTATTGGATTACCAATAGTTCATTAACACTAGTTCAGCACTTTGCTCTTAGAAATCCTACTATCCTTGGAGAATTGGGCTTAATTGACAAGAATCGTCAAAAAGCAGGTTCTGAGCAAATTGGTGCTTCTGAAACGCCTCGTTTACAAGACAATAGTACTATAGCAGCTACGAAGGAAAATGTTTCTCCCGAAAAGAACCCGCTGGATTCACCTGAAAAGTGGCATAAAATACCTATAGAGAACATGTCCCCTGTAGAACTAACCACTCTTGCAGTCCCATTTCTATCCAGTAATGATAAAGAAAGTGCAATACCTTTACTAAAACTAGCACTTGATAAGGACCCTGAATACTTGCGAGCTTTGGTTCTAATGGGACGGGTTCTCTTGCTGAAACAAATAAATGATGAAGCCGTTGAATACTTTGAGCGTGCAATATCAAAGCTTTCACTGGCTGGCATCCCAACTGATCCAGAAGAGGTTGATTTTTTGATTCTTTCATCTCAATGGGCTGGAATTGCCTGTGAACGACAGGGAAAGAAGGAAGAAGGACGGGTACACTTTGAAAGAGTTGCAAATATGGAAGAGCCCGAAGATCCTACTAGCAAAGGCTATTATTTTGATGGGTTGCTGCTGCTTGCCAGCACTTTATATGATGCTGGTCAAAAGGCCGAAGCAGCAAAGTATCTGCGTCTTGTTGTTGCTTATAATCCTGGTTATAAGAAATTCTTGGAAAAATGTGAGCAACATGAAGATTTAGCAAGTGATCTTGCCCGTAGTAGGAGGGAATTCTGA 1695 0.4454 MATAAVLRSILRRSRSSPLLHLPRALTSHPLPPLHSPSTPHSPTPASLDAFRTRAFSTHSFNDRESETETFGLDSPVHSEILKAVADSAGAGGEDSPVFPIRAVISILESYHDLTGFPWWITIVSSTFALRIVMLFPLVFTLHKLKRIAEFAPKLPPPFPPPFSGKSYMRQMSFFEEKRKAIGCPSYAWPLVPFMVQIPCFFLWMISIRRMSLDDHPGFDCGGALWFQNLSEFSHGYSGFTFPFLMASLHYIIVQVSFKKPLVEETKDIFGLLSTYYKRYLDFLTLPIAFIGFCIPQGSQLYWITNSSLTLVQHFALRNPTILGELGLIDKNRQKAGSEQIGASETPRLQDNSTIAATKENVSPEKNPLDSPEKWHKIPIENMSPVELTTLAVPFLSSNDKESAIPLLKLALDKDPEYLRALVLMGRVLLLKQINDEAVEYFERAISKLSLAGIPTDPEEVDFLILSSQWAGIACERQGKKEEGRVHFERVANMEEPEDPTSKGYYFDGLLLLASTLYDAGQKAEAAKYLRLVVAYNPGYKKFLEKCEQHEDLASDLARSRREF 564
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g02941 564 Gene3D Tetratricopeptide repeat domain 375 563 IPR011990 GO:0005515
Vivi6g02941 564 PANTHER OXA1 88 340 IPR001708 GO:0016020|GO:0032977
Vivi6g02941 564 SMART tpr_5 385 418 IPR019734 GO:0005515
Vivi6g02941 564 SMART tpr_5 419 452 IPR019734 GO:0005515
Vivi6g02941 564 SMART tpr_5 507 540 IPR019734 GO:0005515
Vivi6g02941 564 SUPERFAMILY TPR-like 387 541 IPR011990 GO:0005515
Vivi6g02941 564 CDD 5TM_Oxa1-like 116 320 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi6g02941 - - gmx:100797573 830.091
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi6g02941 6 116537735 116548452 Vivi6g02941 6 116537735 116548452 ECH