Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g02486 ATGAAAGAAGAATGTGGGAAAAAGTGGAAAGTGTGTGTAGCTGCAACAATTGGAATTGTGATCTTAATCATATTGACAGTAGTGATCTTAGCATTCACAGTGTTCAAACCAAAACAAGTCGTTAGCACGGTGGATTCGGTCGAGGTTCACGACATGGACATGGGTTTCAGTGTGCTTACCATGAGTGTAAATATGAATGTGACATTGGATGTTAGTGTTTCAGTGAAAAATCCAAATGTGTATGGATTAAAATACTATGATGGATCGGCGCAAATAAATTATAGAGGCCAACTAATCGGCGAAGCACCTATCCCTAACGGAGAGATATCGGGGGGACAAACCAAAGTAGTGAATATGACACTCACTCTTATGGCAGACCGCGTGTTAACTAATACACGGATTTTATCAGACGTTAGTTTGAATACTATGCCACTCAACGCATTCATGAGAGTTTCGGGCGAAGTGAATGTATTAGGCCTTATCAAAATTCATGCAAAATCTATATCATCTTGTAATTTCAACCTACATATTTCTGACAAAAAAATTGTGAACTATGTATGTAAAAAATATAAGAGAGAAGCTTGA 585 0.3778 MKEECGKKWKVCVAATIGIVILIILTVVILAFTVFKPKQVVSTVDSVEVHDMDMGFSVLTMSVNMNVTLDVSVSVKNPNVYGLKYYDGSAQINYRGQLIGEAPIPNGEISGGQTKVVNMTLTLMADRVLTNTRILSDVSLNTMPLNAFMRVSGEVNVLGLIKIHAKSISSCNFNLHISDKKIVNYVCKKYKREA 194
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g02486 194 Pfam Late embryogenesis abundant protein 73 167 IPR004864 -
Vivi6g02486 194 PANTHER LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY 12 176 - -
Vivi6g02486 194 Gene3D - 29 176 - -
Vivi6g02486 194 SUPERFAMILY LEA14-like 65 128 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g02486 Vivi-Chr6 106764810 106766748 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi6g02486 - - vvo:131612047 367.466
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi6g02486 6 106764810 106766748 Vivi7g03223 7 97355365 97356393 PCT