Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g01875 ATGGCTCAACAGGAAGAAGGGTGGCCATTGGGATTGAGATTATTGAATTCTAGAATTGGTTTGGTGAGGAATGGTGATTTTTCTGGTTCAGTTTCATTTAGCACTGTGCTTTCAGCTGATTCTCCCGCACCTTCAACTTATTCTTCATCAGATCTTGACACTCAGTCCACAGGATCATTCTTCCACGACAAGAGCATTACACTAGGCAGCCTCATTCGAATCTCGAGCTTCCTCGAACTCTCAAGAAGGTCAAGCAGGGGAAGAGTGATGGATAACTCAAAGGACAACAAGAAGAATCACAAGCAGAAGCCTTGGTTGTTTTCGCTTTGTTCAAAGCTATGTACTGATGCAGTGATTGGTAATGATGCTCACTCTCTTGGTCATTACCTTGAAGCCGAGAGAAAAGCTGCAAATTCTTACAGAAGGAATCAATGTCTTACAAGTTATAATAATATACCAAATGGGTTTTCACCTATTCAAGACTCAAACTCACTCATTGTTGGAAGCCGAGTCGGTCACCAAGATTGA 528 0.4205 MAQQEEGWPLGLRLLNSRIGLVRNGDFSGSVSFSTVLSADSPAPSTYSSSDLDTQSTGSFFHDKSITLGSLIRISSFLELSRRSSRGRVMDNSKDNKKNHKQKPWLFSLCSKLCTDAVIGNDAHSLGHYLEAERKAANSYRRNQCLTSYNNIPNGFSPIQDSNSLIVGSRVGHQD 175
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g01875 175 PANTHER - 5 173 IPR040344 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g01875 Vivi-Chr6 83770328 83773356 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi6g01875 - - gmx:100811940 241.891
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi6g01875 6 83770328 83773356 Vivi6g01875 6 83770328 83773356 ECH
Vivi6g01875 6 83770328 83773356 Vivi5g01181 5 29969999 29972896 PCT