Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g01568 ATGGGCTGTTTAGATGATGGGCGTTTCATTGTTGAGCTTGAAAATGGAATGAATAACGGTTGTTCTGAAGTGGGAAAAGATGCTTCTGCCATTGAAGATGCTGTCAAGGTTTTGTTGCTGGGTCTAGGAGAAGATATTAACAGAGAAGGTATTAGAAAGACACCACTTCGTGTTGCTAAGGCCCTTCGTGAAGGAACAAGAGGTTACAGGCAAAAGGTAAAGGACATTGTTGAAGGTGCTTTATTCCCCGAAGCTGGTCTTGACAACAGAGTTGGTCATGCTGGTGGAGCAGGCGGACTTGTGATTGTCCGAGATCTCGACTTGTTTTCCTATTGCGAGTCATGCATGCTTCCATTCCAGGTTAAATGTCACGTGGGTTATGTTCCTTCTGGCGAAAGAGTTGTCGGTTTAAGCAAGCTATCTCGTGTTGCTGATGTATTTGCAAAACGGCTCCAAGATCCTCAGCGTCTCGCAAATGAAGTTTGTTCTGCTTTGCATTATGGAATAAAGCCAGCTGGTGTTGCCGTCATACTTCAATGTACACATATCCACTTTCCAGACATAGAATCAATCTTTCTCGACTCAAACCACCAAGGATTGGTTAAGATACTCGTTTCCGCCGGTTCTGGAGTTTTCGAAAATAAAAATGCAGACGAATGGGCTGATTTCTTTAATCTCCTTAAATTTAGAGGTATCAGTATGGAAAAAATCCATGTTAGAGGATCATTGGACTCCTCTTGGTGTCCTTCTCAATCCGCCAAAGTTTCCTCCGAAATCGGACCGGTCAACCCTGCAATGGTCACTGCAGTAGCTTCAATTATTAAATCTTTGGGAGAAGATCCACTGAGGAAGGAGCTTAGAGGAACCCCAACTAGATTTGTGAAGTGGTTAATGAATTTTCAGAACAGCAACTTTGACATGAAGTTGAACGGTTTTCTCAATGGTCGGATAGATTCTTTAACCACGAATGAGATGGTTGACATGGAAAACAAGAAAATATGTTCTGAGCTGAACTTATCATTTTGGTCACAATGCGAGCACCATTTACTTCCATTTCACGGTGTTGTTCACATAGGTTACCTCCTATCAGACGGGTTCAGTCCAATCGGAAAATCTCTCTTACAATCCATAGTACATTTTTACGGTTTCAAGCTTCAAGTTCAGGAGAGGCTTACTAGACAGATAGCTGAAACGATTTCACCGCTGATCGGTGGAGATGTCATAGTTGTTGTAGAGGCAAGCCACACATGTATGATTTCTAGGGGTATTGAAAAATTTGGAAGTAGTACCGCCACTATTGCTGTTTTAGGACGATTCTCGACCGACCTTAAGACAAGGGCTTCCTTCTTGCAGGGTATTCCAAGTTCTAGTTAG 1374 0.4265 MGCLDDGRFIVELENGMNNGCSEVGKDASAIEDAVKVLLLGLGEDINREGIRKTPLRVAKALREGTRGYRQKVKDIVEGALFPEAGLDNRVGHAGGAGGLVIVRDLDLFSYCESCMLPFQVKCHVGYVPSGERVVGLSKLSRVADVFAKRLQDPQRLANEVCSALHYGIKPAGVAVILQCTHIHFPDIESIFLDSNHQGLVKILVSAGSGVFENKNADEWADFFNLLKFRGISMEKIHVRGSLDSSWCPSQSAKVSSEIGPVNPAMVTAVASIIKSLGEDPLRKELRGTPTRFVKWLMNFQNSNFDMKLNGFLNGRIDSLTTNEMVDMENKKICSELNLSFWSQCEHHLLPFHGVVHIGYLLSDGFSPIGKSLLQSIVHFYGFKLQVQERLTRQIAETISPLIGGDVIVVVEASHTCMISRGIEKFGSSTATIAVLGRFSTDLKTRASFLQGIPSSS 457
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g01568 457 SUPERFAMILY Tetrahydrobiopterin biosynthesis enzymes-like 25 228 - -
Vivi6g01568 457 SUPERFAMILY Tetrahydrobiopterin biosynthesis enzymes-like 260 454 - -
Vivi6g01568 457 Gene3D - 94 230 IPR043133 -
Vivi6g01568 457 Gene3D - 261 304 IPR043134 -
Vivi6g01568 457 Gene3D - 22 76 IPR043134 -
Vivi6g01568 457 FunFam GTP cyclohydrolase 1 95 230 - -
Vivi6g01568 457 FunFam GTP cyclohydrolase 1 28 77 - -
Vivi6g01568 457 FunFam GTP cyclohydrolase 1 324 455 - -
Vivi6g01568 457 Gene3D - 322 455 IPR043133 -
Vivi6g01568 457 FunFam GTP cyclohydrolase I 1 260 305 - -
Vivi6g01568 457 Pfam GTP cyclohydrolase I 268 453 IPR020602 -
Vivi6g01568 457 Pfam GTP cyclohydrolase I 31 183 IPR020602 -
Vivi6g01568 457 PANTHER GTP CYCLOHYDROLASE I 23 183 IPR001474 GO:0003934|GO:0046654
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g01568 Vivi-Chr6 71803308 71806362 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi6g01568 K01495 - gmx:100816351 768.844
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi6g01568 6 71803308 71806362 Vivi7g03885 7 104915869 104918730 PCT