Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g01023 ATGGCAGCAAAACCTTCTATTTCAAGTTATAAATCCTCAAAAGGCACAAACGGTAACTTTTTGTACATTCCAAACCAAATTCCTATACCAACCTATGTTCGCATATTGGACACCACCCTCCGCGACGGCGAACAATCCCCCGGGGCCGCGATGTCTTGTAAAGAGAAACTCGACATCGCGCGCCTACTAGTAAAGTTGCGCGTTGACGTCATTGAGGCAGGGTTTCCTTCTGCCTCCAACGAGGACTTCACCGCGGTTAAAATGATTGCGGAAGATGTTGGCAATGATGTTGATTGTGATGGTTATGTTCCTGTTATAGGTGGTATGTGTAGGTGCAATGAGAAGGATGTTGCCATTACATGGGAGGCTGTAAAACATGCAAAAAGGCCGAGAATTTGTACTTTTATAGCAACTAGTCCCATTCACATGGAATACAAACTTAGAAAGACTAAAGATCAGGTACTCAAGATTGCTCGTGATACTGTGAAGTTTGCACGAAGTTTAGGATGTTGTGATATTCAGTTTGGCGCGGAAGATGCTGTCAGATCGGAGAAGCAATTCCTTTATCAAATATTGGGAGAAGTTATCAAAGCTGGGGCAACAACAGTAGTCATACCTGACACTGTGGGCATAGCAATGCCATTTGAATATGGAAATCTCATTGCTGATATAAAGAAGAATACTCCTGGAATTGAGAATGTTATCATTGCAACTCATTGTCATAATGATCTTGGACTTGCTACTGCCAACACCATTGAGGGTGCTCGTGCAGGTGCTAGACAATTAGAAGTAACAATTAATGGTATTGGTGAAAGGGCAGGTAATGCTTCATTAGAAGAGGTTGTAATGGCCTTGACATGCAGGGGTAATGATATCTTAGGTGGTCTACATACAAGAATCAATACAAGACAAATATTAAGGACAAGCAAAATGGTTGAAGAGTACTCTGGGATGCTTTTACAACCGCACAAGGCTCTTGTTGGGGCTAATGCTTTTCTTCATGAGAGTGGCATTCATCAGGATGGAATGTTAAAACATAAAGGCACATATGAAATAATATCTCCTGAGGATATTGGTCTTGAAAGATCCACTGAGGCTAGTATTGTATTGGGGAAGCTTAGTGGACGCCAGGCATTGAGAAAGAGACTTGAAGAGCATGGTTATATACTAAAGGATGATGAACTTGAGACTCTGTTCTGGAAATTCAAACTATTGGCTGGGACAAAAAAGAGAGTAACCAATGCAGACCTTAAAGTATTGATGTCAAATGAAGCATATCAAGATGAACTTGTCTACAAAGCTGCATGA 1308 0.4136 MAAKPSISSYKSSKGTNGNFLYIPNQIPIPTYVRILDTTLRDGEQSPGAAMSCKEKLDIARLLVKLRVDVIEAGFPSASNEDFTAVKMIAEDVGNDVDCDGYVPVIGGMCRCNEKDVAITWEAVKHAKRPRICTFIATSPIHMEYKLRKTKDQVLKIARDTVKFARSLGCCDIQFGAEDAVRSEKQFLYQILGEVIKAGATTVVIPDTVGIAMPFEYGNLIADIKKNTPGIENVIIATHCHNDLGLATANTIEGARAGARQLEVTINGIGERAGNASLEEVVMALTCRGNDILGGLHTRINTRQILRTSKMVEEYSGMLLQPHKALVGANAFLHESGIHQDGMLKHKGTYEIISPEDIGLERSTEASIVLGKLSGRQALRKRLEEHGYILKDDELETLFWKFKLLAGTKKRVTNADLKVLMSNEAYQDELVYKAA 435
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g01023 435 ProSitePatterns Alpha-isopropylmalate and homocitrate synthases signature 2. 236 249 IPR002034 GO:0019752|GO:0046912
Vivi6g01023 435 FunFam 2-isopropylmalate synthase 319 433 - -
Vivi6g01023 435 PANTHER HOMOCITRATE SYNTHASE-RELATED 22 425 - -
Vivi6g01023 435 FunFam 2-isopropylmalate synthase 29 318 - -
Vivi6g01023 435 Pfam HMGL-like 33 312 IPR000891 GO:0003824
Vivi6g01023 435 SUPERFAMILY Aldolase 28 330 - -
Vivi6g01023 435 CDD DRE_TIM_IPMS 35 314 - -
Vivi6g01023 435 Gene3D Aldolase class I 26 318 IPR013785 -
Vivi6g01023 435 ProSitePatterns Alpha-isopropylmalate and homocitrate synthases signature 1. 40 56 IPR002034 GO:0019752|GO:0046912
Vivi6g01023 435 ProSiteProfiles Pyruvate carboxyltransferase domain. 33 306 IPR000891 GO:0003824
Vivi6g01023 435 Gene3D - 320 434 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g01023 Vivi-Chr6 32585358 32608794 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi6g01023 K01649 - gmx:547778 623.239