Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Vivi6g00993 | ATGACTGAAAATGAAACAGAGGTTAAAGATTTGATTAGTTCTCTTGGACTTCAAGAAAAGCAACAATATCCACTGTCACAACATAAGCGCTATATTGTGAAAAATGGGACACCACTTCTGGTACCTGCCAATCCTGCTGCACTATTGAAGAGCAAACTGCTTTCTGCACAGTCAAAGATCCAGATCTTTTTTGAACCTTTTTTGTGGAAAAAAAATGGCTCCTCTACTGTGTGTGATGAAGATTCTGAAGAAAGTGTTAGCAGATTCTTCGAACGTCATTTTGGGAAAGAGATTGTGGACTATCTCATCGATCCTTTTGTTGGAGGTACAAGTGCAGCAGATACTGAATCTCTTTCTATGCGCCATTCTTTCCCAGAGCTATGGAGTTTGGAGAAAAGGTTTGGCTCCATTATAGCAGGGGCTTTACAATCCAGCTTATTTGGTAAAAGGAACAAAACTGGCGAAACTAAAGATGCACCAAGAAAAAACAAGCACCAGCGTGGTTCATTTTCTTTTCATGGTGGGATGCAGACACTGACTGATACATTGTGCAAAGAGCTTGGCAAAGACGACCTTACGTTAAATGCAAAGGTTTTGACACTAGCTTACAGTCATGATGGAAGTTCCCCATCGGAAAACTGGTCTATTACTTGTGCTTCTAACAAAAAAACACAAGATGTTGATGCAGTAATTATGACGGCTCCTCTAGGTAATGTCAAAGACATCCAGATCACCAAAAAGGGAACCCCCTTTTCACTTAATTTCCTTCCCGAGGTGACCTATTTGCCACTTTCAGTCTTAATTACCACCTTTAAAAAGGAGAATGTAAAGAGACCTCTGGAGGGATTTGGAGTTCTCGTCCCTTCAAAAGAGCAACAAAATGGTTTTAAAACTCTCGGTACACTTTTTTCCTCCATGATGTTTCCAGATCGAGCACCCAGTGATATGCATCTCTATACCACCTTCATAGGGGGAACTCGAAATAGGGAACTTGCTCAAGCTTCAACTGATGAACTTAAGAAAATTGTCACTTCTGACCTAAGAAAGCTGTTGGGAGCAGAGGGAGAGCCTACATTCGTCAACCATTTCTACTGGAGTAAAGGCTTTCCTTTATATGGTCGCAACTACGGGTCAGTTCTTGAAGCAATTGACAAGATGGAAAAAGATCTTCCTGGATTTTTCTATGCAGGTAACCACAGAGGTGGAATTTCAGTTGGTAGAGCAATTGCCTCAGGGTGCAAAGCAGCAGATCTTGTAATTTCCTACCTCAACAATGCTTCAGACAACACCGTGTCTGATAAATGA | 1305 | 0.4123 | MTENETEVKDLISSLGLQEKQQYPLSQHKRYIVKNGTPLLVPANPAALLKSKLLSAQSKIQIFFEPFLWKKNGSSTVCDEDSEESVSRFFERHFGKEIVDYLIDPFVGGTSAADTESLSMRHSFPELWSLEKRFGSIIAGALQSSLFGKRNKTGETKDAPRKNKHQRGSFSFHGGMQTLTDTLCKELGKDDLTLNAKVLTLAYSHDGSSPSENWSITCASNKKTQDVDAVIMTAPLGNVKDIQITKKGTPFSLNFLPEVTYLPLSVLITTFKKENVKRPLEGFGVLVPSKEQQNGFKTLGTLFSSMMFPDRAPSDMHLYTTFIGGTRNRELAQASTDELKKIVTSDLRKLLGAEGEPTFVNHFYWSKGFPLYGRNYGSVLEAIDKMEKDLPGFFYAGNHRGGISVGRAIASGCKAADLVISYLNNASDNTVSDK | 434 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Vivi6g00993 | 434 | MobiDBLite | consensus disorder prediction | 149 | 171 | - | - | |
| Vivi6g00993 | 434 | NCBIfam | protoporphyrinogen oxidase | 5 | 424 | IPR004572 | GO:0004729|GO:0006779 | |
| Vivi6g00993 | 434 | Gene3D | Protoporphyrinogen oxidase, mitochondrial; domain 2 | 3 | 372 | - | - | |
| Vivi6g00993 | 434 | SUPERFAMILY | FAD-linked reductases, C-terminal domain | 261 | 370 | - | - | |
| Vivi6g00993 | 434 | PANTHER | PROTOPORPHYRINOGEN OXIDASE | 10 | 428 | - | - | |
| Vivi6g00993 | 434 | SUPERFAMILY | FAD/NAD(P)-binding domain | 6 | 423 | IPR036188 | - | |
| Vivi6g00993 | 434 | MobiDBLite | consensus disorder prediction | 151 | 165 | - | - | |
| Vivi6g00993 | 434 | Gene3D | - | 178 | 416 | IPR036188 | - | |
| Vivi6g00993 | 434 | Pfam | Flavin containing amine oxidoreductase | 4 | 420 | IPR002937 | GO:0016491 | |
| Vivi6g00993 | 434 | FunFam | Protoporphyrinogen oxidase | 41 | 147 | - | - | |
| Vivi6g00993 | 434 | Gene3D | protoporphyrinogen ix oxidase, domain 3 | 41 | 151 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Vivi6g00993 | Vivi-Chr6 | 30678555 | 30689588 | Tandem |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Vivi6g00993 | K00231 | - | gmx:547941 | 734.176 |