Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g00992 ATGACCTCCTCCGTCAAAGACGATAACCAAAGATCTGTTAAAAGAGTTGCTGTTGTTGGTGCTGGGGTAAGTGGGCTTGCTGCAGCTTACAAATTGAAATCACATGGTCTGGATGTAACTGTATTTGAAGCGGAAGGAAGAGCGGGAGGGAGGCTAAGAACGGTTTCTCGAGATGGGCTAGTTTGGGACGAGGGAGCTAATACAATGACTGAAAATGAAACAGAGGTTAAAGATTTGATTAGTTCTCTTGGACTTCAAGAAAAGCAACAATATCCACTGTCACAACATAAGCGCTATATTGTGAAAAATGGGACACCACTTCTGGTACCTGCCAATCCTGCTGCACTATTGAAGAGCAAACTGCTTTCTGCACAGTCAAAGATCCAGATCTTTTTTGAACCTTTTTTGTGGAAAAAAAATGGCTCCTCTACTGTGTGTGATGAAGATTCTGAAGAAAGTGTTAGCAGATTCTTCGAACGTCATTTTGGGAAAGAGATTGTGGACTATCTCATCGATCCTTTTGTTGGAGGTACAAGTGCAGCAGATACTGAATCTCTTTCTATGCGCCATTCTTTCCCAGAGCTATGGAGTTTGGAGAAAAGGTTTGGCTCCATTATAGCAGGGGCTTTACAATCCAGCTTATTTGGTAAAAGGAACAAAACTGGCGAAACTAAAGATGCACCAAGAAAAAACAAGCACCAGCGTGGTTCATTTTCTTTTCATGGTGGGATGCAGACACTGACTGATACATTGTGCAAAGAGCTTGGCAAAGACGACCTTACGTTAAATGCAAAGGTTTTGACACTAGCTTACAGTCATGATGGAAGTTCCCCATCGGAAAACTGGTCTATTACTTGTGCTTCTAACAAAAAAACACAAGATGTTGATGCAGTAATTATGACGGCTCCTCTAGGTAATGTCAAAGACATCCAGATCACCAAAAAGGGAACCCCCTTTTCACTTAATTTCCTTCCCGAGGTGACCTATTTGCCACTTTCAGTCTTAATTACCACCTTTAAAAAGGAGAATGTAAAGAGACCTCTGGAGGGATTTGGAGTTCTCGTCCCTTCAAAAGAGCAACAAAATGGTTTTAAAACTCTCGGTACACTTTTTTCCTCCATGATGTTTCCAGATCGAGCACCCAGTGATATGCATCTCTATACCACCTTCATAGGGGGAACTCGAAATAGGGAACTTGCTCAAGCTTCAACTGATGAACTTAAGAAAATTGTCACTTCTGACCTAAGAAAGCTGTTGGGAGCAGAGGGAGAGCCTACATTCGTCAACCATTTCTACTGGAGTAAAGGCTTTCCTTTATATGGTCGCAACTACGGGTCAGTTCTTGAAGCAATTGACAAGATGGAAAAAGATCTTCCTGGATTTTTCTATGCAGGTAACCACAGAGGTGGAATTTCAGTTGGTAGAGCAATTGCCTCAGGGTGCAAAGCAGCAGATCTTGTAATTTCCTACCTCAACAATGCTTCAGACAACACCGTGTCTGATAAATGA 1509 0.4208 MTSSVKDDNQRSVKRVAVVGAGVSGLAAAYKLKSHGLDVTVFEAEGRAGGRLRTVSRDGLVWDEGANTMTENETEVKDLISSLGLQEKQQYPLSQHKRYIVKNGTPLLVPANPAALLKSKLLSAQSKIQIFFEPFLWKKNGSSTVCDEDSEESVSRFFERHFGKEIVDYLIDPFVGGTSAADTESLSMRHSFPELWSLEKRFGSIIAGALQSSLFGKRNKTGETKDAPRKNKHQRGSFSFHGGMQTLTDTLCKELGKDDLTLNAKVLTLAYSHDGSSPSENWSITCASNKKTQDVDAVIMTAPLGNVKDIQITKKGTPFSLNFLPEVTYLPLSVLITTFKKENVKRPLEGFGVLVPSKEQQNGFKTLGTLFSSMMFPDRAPSDMHLYTTFIGGTRNRELAQASTDELKKIVTSDLRKLLGAEGEPTFVNHFYWSKGFPLYGRNYGSVLEAIDKMEKDLPGFFYAGNHRGGISVGRAIASGCKAADLVISYLNNASDNTVSDK 502
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g00992 502 Gene3D Protoporphyrinogen oxidase, mitochondrial; domain 2 51 440 - -
Vivi6g00992 502 Gene3D - 15 484 IPR036188 -
Vivi6g00992 502 Gene3D protoporphyrinogen ix oxidase, domain 3 109 219 - -
Vivi6g00992 502 PRINTS Adrenodoxin reductase family signature 38 51 - -
Vivi6g00992 502 PRINTS Adrenodoxin reductase family signature 15 37 - -
Vivi6g00992 502 MobiDBLite consensus disorder prediction 217 239 - -
Vivi6g00992 502 FunFam Protoporphyrinogen oxidase 109 215 - -
Vivi6g00992 502 NCBIfam protoporphyrinogen oxidase 14 492 IPR004572 GO:0004729|GO:0006779
Vivi6g00992 502 Pfam Flavin containing amine oxidoreductase 23 488 IPR002937 GO:0016491
Vivi6g00992 502 SUPERFAMILY FAD/NAD(P)-binding domain 14 491 IPR036188 -
Vivi6g00992 502 PANTHER PROTOPORPHYRINOGEN OXIDASE 14 496 - -
Vivi6g00992 502 MobiDBLite consensus disorder prediction 219 233 - -
Vivi6g00992 502 SUPERFAMILY FAD-linked reductases, C-terminal domain 329 438 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g00992 Vivi-Chr6 30678509 30689588 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi6g00992 K00231 - gmx:547941 839.336
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi6g00992 6 30678509 30689588 Vivi6g00992 6 30678509 30689588 ECH