Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g00987 ATGATCAAGTCTAAGGGCTTTTGCTCAAGCAAAAGTCCTTTGTGGATTGCAGCTTTCTTTTTCAAACAGCTCAAGAAAGCTCAAATTTTTGATGCTGACATCTCTTCTTTTGTGGACAGGATTTTGAATCATGAAATGGATGCCGTTTCTTACCGAGTACTTGCATATCTCCTTCTTGGTGTTGTTAAAATATACTCAAAAAAGACCGAGTATATGCTCCATGATTGCAATAAAGTGCTCTCTGGAATCAACAAGTTTTTGATCAGTACAAGGAACAACACACCTGCCAAAACCGTGGGTATATCTTTTACTATACCGAAAATATTTGATTTGGATGCTATCGAGCTTGGTGTACTCGAAGATACTTCCAAATACCATACTGCTCCCCCAGAACAAATCACTCTTAAAGAGGTTTTGCCTGATACTTGGGGATTCACAAAGTTTTCTCACGAGACGTTTGATGATTTTGGTTGTGGCGAAACTAGCAGCTCTCTTGAGCATCTTATGACAGAAAATGTTCTTCAATCTCAATTTAGGAACATTGACTTTGAAGCTTTTCCACCGAGTAGTTCAATTAATGTATTATCTCAAAAAGTTAAGCCATCTGAAGATGAGTTACCTGAAAAGAGTAGAATCTCTCAAGAGCAATCAATTGATTTCAGTATTTTTTTGGGAAGACCGAATAAGGGAGCGGACGAGCTTAATACTTTAAAGGAAACACTAAGATTGTTATGCGAAATACCTGAAGAAATTGCTGACATTGGTGAAGCAATAACCTTTCGAGAAAGTAGAGAAAGATCTCAAATGCATGAAGAAATTGCTGACATTGGTGAAATAATAACCTTTCAAGAAAGTACAGAAAGGTCTCAAATGCGTGAAGAAATTGTTGATGTTGGTGAAGCAATAACCTTTCAAGAAAGTACAGAAAGGTCTCGGGATGATGAATCCTATCCAAAAGAAAATTTTCATCATGACGAGTCATTTGTTGTCAAAGAGAGTGTCGGAGAGCTCATTGAAGGGTCTATTGAAGAGCATTGCATTGAAGAAAATTTAGCATGTCCAAAAAAGGTTTCATTTGGAGATGTAAAATCTAGTGTGAATCCTTCTGTGTCGACGATTATTGACGTTACTCCTCAGTCAAAGTTTCAAGGTGGCTCAATTAGAAGGCCAAAACCAGGTGCTACTACATCAGAATCTACGCTGATTCCGACACCTGATGCAACAGAATGCGGCCGATTATCAAAGAAACGAAAAATTGTTTTTGATGAAAGGATAGTCTTACCCAACAAGGAACTTAAAAAGCGCACACATGATACAAGCGACTTAGTCTCTGTCCGAAGACCAGTGCTACTCTCTTTGCTTGATAAAGAAAGGAGATCTCAAATTTCCCGTCTTCCAGATAGATTTAACGAATCCTTGTTTCCTTGTCACTCCAAAAAGCTCCAGTCTCTCTTTTCGATTAAGAAAATTAAAATACCGGACTCTCTGAAAGTTGTGGAAACGCCGCGGAATTTAGACGTGTCTGAATCCCAAGCTGTTGGCATTCTGGAGCATATTGAAAATGGCCCACAAATCCCTCCTCAGTGTTCAGATTCCATTGGAAATGTGGAAACTGTTGGGAAGTTAAGCGTGTCTGATTATCAAACTTGTGGTAGTTCTGACATCATAGCAACTGCTCCAGAAACTCCTCCCCTGTGCCCAAATGCAAATGTTCGGTCAGTTAAGCCTCTAGAGCAAACTGAAGTTCAAAACTCAGATGACTTTGGGCCTTTAAGTCCCAATGAGAGAGAGCAATCTTCCGAAAAGAGTGATGCTATGGTGGAAGAGTTTAACGCCGTGACTTCAAATTCATATGAAACATTGGAGAAGGAGCAAAGCTTCACAACGGATGAAGATCTTGATCTAATCAACGAGGAGATAAGTTCATCCGAAACTGAGAATTCAAAATTGTCGGGGTGGTCCGAGCGAACAAGGAAGGTTGCATCTTACTTGCACAAGAATTTTCAACATCTAGAGAAACAAAAAGAGGCGGATGCTGTGAACTTGTCACAAGTTTCACAAGGACGAAGCCGGAAAGAATCGGCCAGGCTATTCTATGAAGTACTGGTTCTGAAAACTACAAATTATGTGGATGTACAGCAAAAAGATGCTTATGGTGATATTGCAGTTAGGAAACTCCCCAAATTTGATAAAGCTTTTGGAGTTGATGGGCATTTGAACTGA 2223 0.395 MIKSKGFCSSKSPLWIAAFFFKQLKKAQIFDADISSFVDRILNHEMDAVSYRVLAYLLLGVVKIYSKKTEYMLHDCNKVLSGINKFLISTRNNTPAKTVGISFTIPKIFDLDAIELGVLEDTSKYHTAPPEQITLKEVLPDTWGFTKFSHETFDDFGCGETSSSLEHLMTENVLQSQFRNIDFEAFPPSSSINVLSQKVKPSEDELPEKSRISQEQSIDFSIFLGRPNKGADELNTLKETLRLLCEIPEEIADIGEAITFRESRERSQMHEEIADIGEIITFQESTERSQMREEIVDVGEAITFQESTERSRDDESYPKENFHHDESFVVKESVGELIEGSIEEHCIEENLACPKKVSFGDVKSSVNPSVSTIIDVTPQSKFQGGSIRRPKPGATTSESTLIPTPDATECGRLSKKRKIVFDERIVLPNKELKKRTHDTSDLVSVRRPVLLSLLDKERRSQISRLPDRFNESLFPCHSKKLQSLFSIKKIKIPDSLKVVETPRNLDVSESQAVGILEHIENGPQIPPQCSDSIGNVETVGKLSVSDYQTCGSSDIIATAPETPPLCPNANVRSVKPLEQTEVQNSDDFGPLSPNEREQSSEKSDAMVEEFNAVTSNSYETLEKEQSFTTDEDLDLINEEISSSETENSKLSGWSERTRKVASYLHKNFQHLEKQKEADAVNLSQVSQGRSRKESARLFYEVLVLKTTNYVDVQQKDAYGDIAVRKLPKFDKAFGVDGHLN 740
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g00987 740 MobiDBLite consensus disorder prediction 581 604 - -
Vivi6g00987 740 MobiDBLite consensus disorder prediction 306 323 - -
Vivi6g00987 740 Gene3D Structural maintenance of chromosome 1. Chain E 655 733 IPR023093 -
Vivi6g00987 740 CDD Rad21_Rec8_M_AtSYN1-like 412 486 - -
Vivi6g00987 740 MobiDBLite consensus disorder prediction 581 596 - -
Vivi6g00987 740 FunFam Sister chromatid cohesion 1 protein 4 656 733 - -
Vivi6g00987 740 Pfam Conserved region of Rad21 / Rec8 like protein 677 729 IPR006909 -
Vivi6g00987 740 MobiDBLite consensus disorder prediction 381 403 - -
Vivi6g00987 740 Pfam N terminus of Rad21 / Rec8 like protein 14 91 IPR006910 GO:0005515
Vivi6g00987 740 SUPERFAMILY "Winged helix" DNA-binding domain 656 729 IPR036390 -
Vivi6g00987 740 MobiDBLite consensus disorder prediction 302 323 - -
Vivi6g00987 740 PANTHER SCC1 / RAD21 FAMILY MEMBER 9 731 IPR039781 GO:0007062|GO:0008278
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g00987 Vivi-Chr6 30474588 30481043 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi6g00987 K06670 - qsa:O6P43_008829 365.54