Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g00323 ATGAAGTTTGGAAAAGAATTTGTGTCCCAAATGGTGCCAGAATGGCAAGAAGCATACATGAATTACGAGTCTCTCAAATCCATTCTGAAAGATATTTCAAAGTACAAGGCAGAAAATCAATCAACAGGACGAAGGGCATCAACATCAGCATCGAAAGGATCATTGAGGAGAAGGTTAACTCTCTATAGAGCTTATAGTGGTCTTAATGATAGGCATAGAGAGTCTTCAAAGAAAAATGAGGACGAAGTCATACTTATTCAGTCAGTTGAAGGTGAAGATTCACAAGGGTTTTACCAAACCATGTTCTTAAGAGCTTCTGAAGAGGGAGCAGAAAAAGATCTCGAGTTTTTCAAGAAACTTGATTTTGAGTTTAATAAGGTTAATGCATTTTATAAGAAGATTGTTAAAAAAGTGGTTGATGAAGCTGAGGAGTTAAGTAAGCAAATTAATTATCTTATTGCTTTTAGAATAAAGGTGGAAAAGATTGGGTTTACAAATCTTGATAGCAATGAAACCTCTTCAACTGCCAAACATGGTCACCCAAGTCTACATATGGATGCGATTCGTGAGGTTGAAATGAACAATGGCAATCTTTTTCAAGAAGATAGAAAACATGTAGCACAGACCAATTCTAAGAATCCCATGGAGAGCTTTAGACCAGCTCCTGTAGACGTTCTTGAACATGTGAAGATCAATGTGAGCCCACCAGAAACTCCTGTAGCAACCATAAAAGGTCTTTTAACAAATTCAAAACCTGATGATACATTTAACGAGAAAGAGTTTAAGAAAGCAGAAGAGCAACTTAGTGCAGCCTTCAAGGAATTACATCATAAGCTGAGACTTCTAAAACAATACAGCTTCTTAAATTTGTTGGCATTCACAAAAATCATGAAGAAGTATGATAAGGTCAGTTCAAGGAATGCATCAAAAGCTTACCGAAAGATGGTGGAGAGTTCTTATATTGGCAGCTCAGATGAGGTTACTAGGCTCATGGATAGAGTGGAACATGCCTTCATTAAACACTTTGCAAATGGGAATCATAGAAAAGGAATGAACATATTAAGACCGACAATGAAGAGGGAGCGGCATAGAACTACATTCTTGTTAGGAGTATTTACTGGCTGCGCAATTGCTCTCATTGCAGCACTAATTATACTCATACATGCAAGAAATATTCTAAATAGTGAAGGTAGAACGAGATATATGGAAAACATATTTCCACTTTATAGTCTCTTTGGATACATTGTGTTCCATATGATCATGTACTCTGTGAACACATACTTATGGAGGCTTTTTAGAATCAACTATCCATTTATATTTGGATTCAAAGAAGGAACTGAGTTAGCTTATAAAGAAGTATTTCTTCTTAGCTCCGGCCTTGCAGTACTTTCTTTGATTGCGGTTCTTTCAAACTTAGATATGGAGATGGATCAAAGAACCAAAAGTTTCTCAGCACTTACAGAATTAGTGCCTTTAGGCCTAATCATATTTCTGCTTGCCGTAACAGTTTGTCCCTTCAATATCATATATAAATCCAGTCGCTTCTGCCTTATTCGAGCTGCATTTCACACCATTTGTGCTCCTCTCTATAAGGTCCATTTTCTAGATAGTTTTTTGGCAGATCAGCTTACTACCCAGGTGCAATCATTTAGATGTTTGGAATTCTATGTTTGCTACTACTTTTGGGGGGATTTCTTGACCAGATCAAATAAGTGCAATGATAGTGGAATCTATAGAATGTTTTATTTAATTGTAGCTATTATTCCATATTGGATCCGTTTACTTCAGTGTGTTCGCCGATTACTCGAAGACAAAAATACAACGCATGGACTCAATGCACTAAAATACATCTCAACAATAATTGCAGTTATTCTGAGAACTTCTAGTGAGTCTCACACTGGACTTGTTTGGAAAATTCTCGCTGCAACTTCTTCAAGCATTGCAACAGTTTATAATACTTATTGGGATTTTGTCATGGATTGGGGTTTGCTAGTAAGAGGCTCAAGAAATCCATGGTTGAGAGATAAACTCCTCGTACCATACAAAAGTGTATATTTTGTTTCTATGGCAGTGAATGTTATCCTGAGGTTTGCATGGATGCAATCTGTTTTAGGCATTAAGGATGCTCCTCTCCTTCATAAAACAGCTTTGACTGCTATTATAACTTGTTTGGAGATCCTTCGCCGCGGCATTTGGAATTTTTTCAGGTTGGAGAATGAGCATTTGCACAATGTAGGAAAGTTTAGAGCGTTCAAATCAATAGCTCTTCCTTTCAACTATCTAGATGATGATGAAGATTGA 2301 0.369 MKFGKEFVSQMVPEWQEAYMNYESLKSILKDISKYKAENQSTGRRASTSASKGSLRRRLTLYRAYSGLNDRHRESSKKNEDEVILIQSVEGEDSQGFYQTMFLRASEEGAEKDLEFFKKLDFEFNKVNAFYKKIVKKVVDEAEELSKQINYLIAFRIKVEKIGFTNLDSNETSSTAKHGHPSLHMDAIREVEMNNGNLFQEDRKHVAQTNSKNPMESFRPAPVDVLEHVKINVSPPETPVATIKGLLTNSKPDDTFNEKEFKKAEEQLSAAFKELHHKLRLLKQYSFLNLLAFTKIMKKYDKVSSRNASKAYRKMVESSYIGSSDEVTRLMDRVEHAFIKHFANGNHRKGMNILRPTMKRERHRTTFLLGVFTGCAIALIAALIILIHARNILNSEGRTRYMENIFPLYSLFGYIVFHMIMYSVNTYLWRLFRINYPFIFGFKEGTELAYKEVFLLSSGLAVLSLIAVLSNLDMEMDQRTKSFSALTELVPLGLIIFLLAVTVCPFNIIYKSSRFCLIRAAFHTICAPLYKVHFLDSFLADQLTTQVQSFRCLEFYVCYYFWGDFLTRSNKCNDSGIYRMFYLIVAIIPYWIRLLQCVRRLLEDKNTTHGLNALKYISTIIAVILRTSSESHTGLVWKILAATSSSIATVYNTYWDFVMDWGLLVRGSRNPWLRDKLLVPYKSVYFVSMAVNVILRFAWMQSVLGIKDAPLLHKTALTAIITCLEILRRGIWNFFRLENEHLHNVGKFRAFKSIALPFNYLDDDED 766
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g00323 766 Coils Coil 761 766 - -
Vivi6g00323 766 CDD SPX_PHO1_like 2 310 IPR034092 -
Vivi6g00323 766 PANTHER XENOTROPIC AND POLYTROPIC RETROVIRUS RECEPTOR 1-RELATED 1 763 - -
Vivi6g00323 766 ProSiteProfiles EXS domain profile. 573 766 IPR004342 GO:0016020
Vivi6g00323 766 ProSiteProfiles SPX domain profile. 1 314 IPR004331 -
Vivi6g00323 766 Pfam EXS family 406 742 IPR004342 GO:0016020
Vivi6g00323 766 Pfam SPX domain 1 316 IPR004331 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g00323 Vivi-Chr6 8109763 8117273 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi6g00323 - - gmx:100780548 1113.98
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi6g00323 6 8109763 8117273 Vivi6g00323 6 8109763 8117273 ECH