Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g00228 ATGTCGAATATTGACAATATTTTTCTTTGTTTACTTTTATTTTGTGTTCATGTTGCAATAGTTTCTGCAGAATCAAATTGGCTAAGCCATGGTGGAGATTTGCTCAACCGAAGATACGCGAACGAAGAATACAAAATCAGTCCGAAAACGGTTCATAAACTACGATTGAAGTGGAAATTCTTTGCTGGGCAAGATATTACGGCGACACCGACGATATATGATGGTGTAATATATTTTCCAAGCTGGAATGGTAATGTTTATGCAATAAAAGAAGATGATGGGTCACTTGTTTGGGAGAAAAATTTGAAGGAATTGACAGGCTTAAATGCAACTGTCTTTATTTTTAATGCAAATGGAACAGTTTCTAGAGTGAGTCCAAGTGTGGCTGGAGATTTGTTGATTTTGGGAATTTATGGGCCTGCTGTTGTTGTTGGTTTGAATAGAACAAATGGGGAGCTTGTTTGGTTGACAAGGTTGGAAAGTCATTATAGGTCATTTGTTACCATGTCGGGAACATATTACAATGGGAGTTACTATGTTGGAACATCTTCACTAGAAGAATTGGTAGCAATTGATAAATGTTGTACATTTCGTGGAAGCTTTGTAAAACTTGATGTTAAAACCGGTGCCATTTTATGGCAAACCTATATGTTACCCGATAACAAAGGAAAACGAGATCAATATGCAGGCGCGGCCATTTGGGGAAGTAGTCCTTCTATTGATGTATATAGAAAACATGTCTATATCGCCACTGGAAATCTCTATTCTGCTCCGAAAAACATACTTGATTGTCAAGATAGACAAAATAATCAAACTACTCCGGTTGAAACGGACGAGTGTATTGAACCAGAAAACCACTCGAATTCAATGTTGGCCCTTGATTTGGACACTGGTGATATCAAATGGTACAAACAATTAGGAGGGTTGGATGTATGGTTTATCGCGTGTAACAATGCTTCAACTCCTGGTTGTCCGCCTCCAGGTCCTTTACCAGATTCTGATTTCGGAGAGGCGCCGGTGATGTTAACTACACGTGTAAATGGAACAAAGAAAGATATTGTTGTTGCTGTTCAGAAAAGTGGATTCGCATGGGCGCTTGATCGCGACAACGGAACCCTTCAATGGTTTAAGCAAGTAGGGCCTAGTGGAAACGGTGGAGGTGGAATATGGGGTGCATCGACAGATGAAAAAAGAGTTTATACCAATAGTGCAAATTCAGATAAAGATAATTTCCAACTTTTACCATCAAACAAGAACACAACCACTGGAGGATGGGTGGCAATGGATTCTAGAAATGGAGAAATTCTTTGGTCGACTGCTAACCCTGCAAATAGTACTGTTAGTGGCCCGGTTAGTATGGCGAACAAAGTTCTTTTTGGTGGATCGACCGATTTATCAGGACATTTATATGCAATGAATGCGAGAAATGGGAAAATTTTATGGTCCTATGCAACTGGAGGTAGTGTGTATGGAGGCATGTCAATTAACAACGGATGTGTTTATTCGGGTCATGGATATAATGTCTCTGCAGGAGTTTTCTCTAACTATACCGGTGGAACCTCGCTATTTGCCTTTTGTGTTTAA 1584 0.3965 MSNIDNIFLCLLLFCVHVAIVSAESNWLSHGGDLLNRRYANEEYKISPKTVHKLRLKWKFFAGQDITATPTIYDGVIYFPSWNGNVYAIKEDDGSLVWEKNLKELTGLNATVFIFNANGTVSRVSPSVAGDLLILGIYGPAVVVGLNRTNGELVWLTRLESHYRSFVTMSGTYYNGSYYVGTSSLEELVAIDKCCTFRGSFVKLDVKTGAILWQTYMLPDNKGKRDQYAGAAIWGSSPSIDVYRKHVYIATGNLYSAPKNILDCQDRQNNQTTPVETDECIEPENHSNSMLALDLDTGDIKWYKQLGGLDVWFIACNNASTPGCPPPGPLPDSDFGEAPVMLTTRVNGTKKDIVVAVQKSGFAWALDRDNGTLQWFKQVGPSGNGGGGIWGASTDEKRVYTNSANSDKDNFQLLPSNKNTTTGGWVAMDSRNGEILWSTANPANSTVSGPVSMANKVLFGGSTDLSGHLYAMNARNGKILWSYATGGSVYGGMSINNGCVYSGHGYNVSAGVFSNYTGGTSLFAFCV 527
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g00228 527 Pfam PQQ-like domain 84 483 IPR002372 -
Vivi6g00228 527 SUPERFAMILY Quinoprotein alcohol dehydrogenase-like 20 491 IPR011047 -
Vivi6g00228 527 PANTHER QUINOPROTEIN ALCOHOL DEHYDROGENASE (CYTOCHROME C) 23 527 - -
Vivi6g00228 527 Gene3D - 17 496 - -
Vivi6g00228 527 SMART ire1_9 170 216 IPR018391 -
Vivi6g00228 527 SMART ire1_9 70 101 IPR018391 -
Vivi6g00228 527 SMART ire1_9 126 158 IPR018391 -
Vivi6g00228 527 SMART ire1_9 450 484 IPR018391 -
Vivi6g00228 527 SMART ire1_9 239 305 IPR018391 -
Vivi6g00228 527 SMART ire1_9 392 440 IPR018391 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g00228 Vivi-Chr6 5291965 5294038 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi6g00228 - - vvo:131611051 834.713
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi6g00228 6 5291965 5294038 Vivi6g00228 6 5291965 5294038 ECH