Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g00181 ATGGGCTCATTTTTCTCTTCCCTCCTCGGCGCCGACGCCGCCGCAACCACCTCACAATCCTCGGATCAATCCGTCAAAACCTTCCACTCATCCGCACGCTGGCAGCTCCACTTCAACGAAATCAAAGACTCCCCTAAACTCGTTGTGATTGATTTCTCTGCTACTTGGTGTGGACCCTGTAAGATGATGGAACCGATTGTTCATGCTTTCGCTAACGAATTCACTGATGTTGAATTCATCAAGATCGACGTTGACGAATTATCTGATGTGGCGCGGGAATTTAAGGTGCAGGCTATGCCGACGTTTTTGTTGTTGAAGAATGGGAAAGAGGTTGATAAGATTGTTGGTGCGAAAAAAGATGAACTCAAAACCAAGATTCAAAGGCACAGAGCTTAG 396 0.4672 MGSFFSSLLGADAAATTSQSSDQSVKTFHSSARWQLHFNEIKDSPKLVVIDFSATWCGPCKMMEPIVHAFANEFTDVEFIKIDVDELSDVAREFKVQAMPTFLLLKNGKEVDKIVGAKKDELKTKIQRHRA 131
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g00181 131 CDD TRX_family 37 127 - -
Vivi6g00181 131 Pfam Thioredoxin 38 127 IPR013766 -
Vivi6g00181 131 SUPERFAMILY Thioredoxin-like 35 129 IPR036249 -
Vivi6g00181 131 PRINTS Thioredoxin family signature 95 106 - -
Vivi6g00181 131 PRINTS Thioredoxin family signature 48 56 - -
Vivi6g00181 131 PRINTS Thioredoxin family signature 56 65 - -
Vivi6g00181 131 FunFam Thioredoxin 24 131 - -
Vivi6g00181 131 ProSitePatterns Thioredoxin family active site. 49 67 IPR017937 -
Vivi6g00181 131 Gene3D Glutaredoxin 9 131 - -
Vivi6g00181 131 ProSiteProfiles Thioredoxin domain profile. 7 131 IPR013766 -
Vivi6g00181 131 NCBIfam thioredoxin 39 128 IPR005746 GO:0015035
Vivi6g00181 131 PANTHER THIOREDOXIN 25 127 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g00181 Vivi-Chr6 4653415 4654387 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi6g00181 K03671 - qsa:O6P43_009051 189.119
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi6g00181 6 4653415 4654387 Vivi6g00181 6 4653415 4654387 ECH