Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g00149 ATGAATATTCCTCAAGGTGTCTCAGCTCCAGCACCTAACCAGGTACGCAAGCTTGTGAAATCTCTTTATGGTTTGAAACAAGCTAGCCATCTGAAGACTTCCTTGCATCAGTCATTCCAAATTAAGGATCTTGGTGAACTCAAATTCTTTCTAGGGCTTGAGGTGGCTCGCTCTTTTAAAGGTATTACACTATGTCAACGGAAGTATTGTCTTGAATTACTTCAAGATGCTGGATTAACAGGTTGTAAACCTGCATCTACCCCTTTAGATGCCTCTATTCGCCTCCATAATGATAACGGTTCTTTGATGCTGATTAGGGAGGGTGTATTGACACCAGGAGATCTATCTCTGGCTATTGCTTCTTCATTGGCAGGAGTGATACGTTTGCTTCCGGTTCCTTCCCAAGCTCAGGCTGCTGACGTTTTCACTAAAGCTCTTGACCTCATCCCTTCTTTGAGTGTCTTTGCAAGCTTCCTTTGGTCGACATCCACCAACCTCAAGCTTGTGGGGGGAAGTGCTAAGAAAGTACTAAGAAAGTTAGGAGAACAAAGTGAAAACTGTTGTATCATTGAGGAGAAGAAGAAAGGGACTCTTGCTAGCATGTTGATGAGAGAGTTAGGAATTAGGATGCTACAAGATCAGTTTAATGTTAGATTTTCAACATCTCAGGTGTTGAGTTTGGTGATGAATAAACTCTATAAGCAATTTGTTGAGAAAGACATCAAAGAGTTTGAAGCATTCCATGTTGCTATTCTTGATACCTTCAACACAATTAACATGGCTCTACCGGGGAAGCATTATGATGCCCCGTCATATAAGGATATAAAGGAAATTTCAAAACGTTGGGAAGAATCTAATGAAGAAGCTAGAAAGGAGATGTTCAGAGACTTCGTGAATAAGAATGTGAATCTCAACAAAGTAGATGAATCTATGATAATCACTGCAATAGTGGCACCACCAGCAGCCATGGTGGCTAAAAGAACCGGACAAGGAACGTTCCCTTCGCTAAAATTTATGAATGCCATTCCTGATGTTGTGTTTGTTCCTTCAGCTACTGTTTTGGCTCTCATTGCTGTCAAAATCCTAAGGTTAATGTTCATAGGCAATGGCACGACATCAAAGGTTGCAACAGGGTCACTTGTTGATCATGTAGTGCAGCCTTTAAGTGTTGATAATATTCTTCCACCTGCTGCACCTGAAACTACATCAGATCATTCACAGCAAGACATATTAAAACCCGAATCGGATCATTCACAACAAGAGATACCAAAACATGCACCAGATCATTTACGGCAAGACATACCAAAACCTGTATTGGATCGTTCACAACAAGACATACCAAAACCTGCACCGGATCGTTCACAGCAAGACATACCAAAACCTTCACAGCAAGACATACCAAAACCTGCACCGGATCATTCAGAGCAAGACATACCAAAAACTGCATCAAATTATTCACAACAAGACAAAAATATTAGATACCCTAATGTACCACTAGACCCCCTTAGCGCTCAATCTTTAGAGATAAAAGTCCTAAAAAATGGACAAAGACTAAGGATGACGATGTTGAACACTGTTAGAATATCTCACAATCACTCTAAAGATACAAGGTGTTAG 1617 0.4063 MNIPQGVSAPAPNQVRKLVKSLYGLKQASHLKTSLHQSFQIKDLGELKFFLGLEVARSFKGITLCQRKYCLELLQDAGLTGCKPASTPLDASIRLHNDNGSLMLIREGVLTPGDLSLAIASSLAGVIRLLPVPSQAQAADVFTKALDLIPSLSVFASFLWSTSTNLKLVGGSAKKVLRKLGEQSENCCIIEEKKKGTLASMLMRELGIRMLQDQFNVRFSTSQVLSLVMNKLYKQFVEKDIKEFEAFHVAILDTFNTINMALPGKHYDAPSYKDIKEISKRWEESNEEARKEMFRDFVNKNVNLNKVDESMIITAIVAPPAAMVAKRTGQGTFPSLKFMNAIPDVVFVPSATVLALIAVKILRLMFIGNGTTSKVATGSLVDHVVQPLSVDNILPPAAPETTSDHSQQDILKPESDHSQQEIPKHAPDHLRQDIPKPVLDRSQQDIPKPAPDRSQQDIPKPSQQDIPKPAPDHSEQDIPKTASNYSQQDKNIRYPNVPLDPLSAQSLEIKVLKNGQRLRMTMLNTVRISHNHSKDTRC 538
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g00149 538 MobiDBLite consensus disorder prediction 407 438 - -
Vivi6g00149 538 MobiDBLite consensus disorder prediction 477 493 - -
Vivi6g00149 538 Coils Coil 272 292 - -
Vivi6g00149 538 Pfam Reverse transcriptase (RNA-dependent DNA polymerase) 31 89 IPR013103 -
Vivi6g00149 538 MobiDBLite consensus disorder prediction 392 497 - -
Vivi6g00149 538 PANTHER CALCIUM ION-BINDING PROTEIN 220 369 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g00149 Vivi-Chr6 4078817 4084630 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi6g00149 31 100 Receptor kinase-like Gene Family AT4G23160 54.286 1.37e-18 87.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi6g00149 - - vvo:131611060 1058.9
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi7g03312 7 98645268 98646591 Vivi6g00149 6 4078817 4084630 PCT