Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g00002 ATGGAGGCGATCACTGCTTCCTTAGAGAGGTCTCTTCAAAACTGTTCCCTAAACAACAACAACCACCACCAACCGAATGGAAGGACGGAAGACGAGGGTTCCGCCACCACAGATGCAGCGGCAGAAGGAGGAGGAAGAAGAAGCATAGGAATCTCATCCAGCACCTCAGAAGATAATAATAATCATATCACCAACAACTCCGACACCACGTTAGAGCTCAACTCTCACATCTCTCTCCCTTACCATTGGGAACAATGCTTAGACTTAAAGACGGGAGAGATTTATTACTTAAACTGGAGGAACGGGATGAAAGCGAAGGAGGATCCGAGAAGAGTAGAAGAAGAAGAAGAGTCGGAGGAGGAGGAAGAAGAAGAAGAAGAAGAAGAGAGTTGGTATGATGATAGTGAAGAATGTTCATCGGAGTGTTCAACGAATGAGAGAGAGGTAGGAGAGAAAGAGAAAGAGAATGTTCTGGTAGTTGCTGGTTGCAAGAGCTGTTTGATGTATTTCATGGTGCCAAAACAAGTTGAAGACTGCCCAAAATGTAATGGTCAACTTCTCCACTTTGATCGATCCGAAAATTGCTCCCCTTGA 594 0.4495 MEAITASLERSLQNCSLNNNNHHQPNGRTEDEGSATTDAAAEGGGRRSIGISSSTSEDNNNHITNNSDTTLELNSHISLPYHWEQCLDLKTGEIYYLNWRNGMKAKEDPRRVEEEEESEEEEEEEEEEESWYDDSEECSSECSTNEREVGEKEKENVLVVAGCKSCLMYFMVPKQVEDCPKCNGQLLHFDRSENCSP 197
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g00002 197 MobiDBLite consensus disorder prediction 48 66 - -
Vivi6g00002 197 MobiDBLite consensus disorder prediction 15 66 - -
Vivi6g00002 197 MobiDBLite consensus disorder prediction 113 136 - -
Vivi6g00002 197 MobiDBLite consensus disorder prediction 105 151 - -
Vivi6g00002 197 Coils Coil 110 130 - -
Vivi6g00002 197 PANTHER BOMB/KIRA PROTEINS 1 131 - -
Vivi6g00002 197 SUPERFAMILY WW domain 75 110 IPR036020 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g00002 Vivi-Chr6 277279 278956 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi6g00002 - - pvu:PHAVU_008G000400g 238.424
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi6g00002 6 277279 278956 Vivi6g00002 6 277279 278956 ECH