Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g06624 ATGGCGGAATTTTCCGGTGAAGTAGGAATGGAAGCGACGGTTGTGACGCCGACGCCGACGTCGTTGACGGTTTCTGGATCGTTTAAAGAAGGGAGAAACTCTTCCAGGAGACGTCAGCATTCCATGAGGCCTAGTTTGGATGCGGATGAGTTCATGAATTTGCTTCACGGTTCGGATCCGGTGAAGTTGGAACTTAATCGGCTTGAGAATGATGTTAGAGATAAGGACAGAGAATTATCAGAAGCTCATGCGGAGATCAAAGCGTTGAAACACTCTGAACGACTCAGAGAAAAAGCAGTTGAAGAGCTTACTGAAGAATTGTCCAAGGTTGATGGAAAGCTGAAGTTAACAGAAAATCTTCTAGAAAGCAAAAATCTTGAAATAAAGAAAATCAATGATGAAAAAAAAGCATCGATGGCAGCTCAGTTTGCAGCTGAAGCTACTCTTCGAAGGGTCCATGCTGCACAGAAGGATGACGACATGCCTCCTATAGAAGCCATTCTAGCCCCGTTAGAGGCTGAACTCAAGCTTGCTCGGCAAGAGATTGCTAAACTTCAAGATGATAACAGAGCTTTAGACCGTCTTACGAAATCTAAAGAAGCAGCTCTTCTTGAAGCTGAAAGGACCGTGCAGGTTGCCTTGGCTAAGGCCTCCATGGTGGATGATCTACAAAATAAAAATCAAGAGCTAATGAAACAAATTGAGATTTGCCAGGAAGAAAACAAAATTTTGGACAAAATGCTTAGACTAAAGGTGGCAGAGGTTGAAAAGCTGACCCAGACTGTGAGGGAACTAGAGGAGGCTGTCCTTGCAGGGGGTGCAGCTGCAAATGCTGTGAGAGATTATCAGCGAAAATTTCAAGAAATGAATGAAGAAAGAAAAACTCTTGATCGGGAGTTGGCTCGTGCCAAGGTAACAGCTAACAGAGTAGCTACAGTAGTGGCAAATGAATGGAAAGATGCTAATGACAAAGTGATGCCTGTCAAACAATGGCTTGAAGAGCGACGGTTCTTGCAGGGAGAGATGCAGCAACTTCGGGAAAAGCTTGCTACAGCTGACCGCACTGCAAAGTACGAAGCTCAGTTAAAAGAAAAATATCAATTACGGCTTAAAGTGCTACAAGAGAGTTTGAGAGAAACTTCTAACAGTATTAATCGCGGGACTTCAGAGGGAAGATGTGTTAGCAATGGGCCTTCTACTAGCAATGGGCCTTCCCGAAGACTATCTCTAGGTGGAGCTGATAACATATCCAAACTGAATTCTAATGGGCTTCTGACTAAGAGAACATCATCCTTTCAAATAAGGTCCTCTGTGTCCTCCAGCACAATTTTGAAGAATGCTAAAGGTGCATCTAAGTCTTTTGATGGTGGTTCGAGGTCACTAGAAAGGAGTAAAATTCTTCTAAATGGAAAGCCTCCAAGTTCCTCGTTTAACCAGTCTTCTGAAAGAACTAAAGACAAAGAGGAAAACAATAATTGGAAAGGAAGTTTGGATGATAAGCCAAATGACTTCCCATTAGTAGATGTAGAGGATAGCGTTCCAGGAGTTTTGTATGATTTTCTGCAGAAAGAGGTCATAGTGTTGAGGAAAGCTGGTAATGAAAAAGATCAAATCCTAAAAGATAAAGACGATGCCATAGAGATGCTAGCAAAGAAAGTGGATACATTGACCAAAGCTATGGAAGTTGAGGCAAAGAAGATGCGAAGGGAAGTAGCTGTCATGGAGAAGGAGGTAGCTGCAATGCGCGTGGACAAAGAACAAGAGACAAAAGCCAAACGTTTCAGCAATGTGAAGAGCTCTATGAACAGTGCTCAGCAACAGCTTGTTTCTGGGAGAAACATGACACGAGGAGGATTAACACGCAGCACCCAGTGA 1875 0.432 MAEFSGEVGMEATVVTPTPTSLTVSGSFKEGRNSSRRRQHSMRPSLDADEFMNLLHGSDPVKLELNRLENDVRDKDRELSEAHAEIKALKHSERLREKAVEELTEELSKVDGKLKLTENLLESKNLEIKKINDEKKASMAAQFAAEATLRRVHAAQKDDDMPPIEAILAPLEAELKLARQEIAKLQDDNRALDRLTKSKEAALLEAERTVQVALAKASMVDDLQNKNQELMKQIEICQEENKILDKMLRLKVAEVEKLTQTVRELEEAVLAGGAAANAVRDYQRKFQEMNEERKTLDRELARAKVTANRVATVVANEWKDANDKVMPVKQWLEERRFLQGEMQQLREKLATADRTAKYEAQLKEKYQLRLKVLQESLRETSNSINRGTSEGRCVSNGPSTSNGPSRRLSLGGADNISKLNSNGLLTKRTSSFQIRSSVSSSTILKNAKGASKSFDGGSRSLERSKILLNGKPPSSSFNQSSERTKDKEENNNWKGSLDDKPNDFPLVDVEDSVPGVLYDFLQKEVIVLRKAGNEKDQILKDKDDAIEMLAKKVDTLTKAMEVEAKKMRREVAVMEKEVAAMRVDKEQETKAKRFSNVKSSMNSAQQQLVSGRNMTRGGLTRSTQ 624
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g06624 624 Coils Coil 100 134 - -
Vivi5g06624 624 Pfam Microtubule-associated protein 70 49 605 IPR009768 GO:0007010|GO:0008017
Vivi5g06624 624 Coils Coil 363 383 - -
Vivi5g06624 624 MobiDBLite consensus disorder prediction 594 624 - -
Vivi5g06624 624 Coils Coil 220 268 - -
Vivi5g06624 624 MobiDBLite consensus disorder prediction 481 501 - -
Vivi5g06624 624 PANTHER MICROTUBULE-ASSOCIATED PROTEIN 70-2 44 603 IPR009768 GO:0007010|GO:0008017
Vivi5g06624 624 MobiDBLite consensus disorder prediction 14 30 - -
Vivi5g06624 624 MobiDBLite consensus disorder prediction 586 624 - -
Vivi5g06624 624 MobiDBLite consensus disorder prediction 1 51 - -
Vivi5g06624 624 Coils Coil 557 584 - -
Vivi5g06624 624 Coils Coil 279 306 - -
Vivi5g06624 624 MobiDBLite consensus disorder prediction 465 501 - -
Vivi5g06624 624 MobiDBLite consensus disorder prediction 31 45 - -
Vivi5g06624 624 Coils Coil 168 195 - -
Vivi5g06624 624 MobiDBLite consensus disorder prediction 381 414 - -
Vivi5g06624 624 Coils Coil 65 92 - -
Vivi5g06624 624 Coils Coil 328 355 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g06624 Vivi-Chr5 173385335 173391214 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g06624 - - gmx:100785173 994.571
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi5g06624 5 173385335 173391214 Vivi5g06624 5 173385335 173391214 ECH