Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g06540 ATGATTTACAATACAATATTTGCCAAAAGCTTTAGTCGTTATGAGCAGAAAAAGTTGGGATATGGAGCATTTGTTGGCTTCTTGCTCATAGTTCTGAGCCTTTGCACAGTGTTTAAGCCTTACTTGGTTCCTACACATGATTTGAACCTGAAGCTCTCTATTGGTGCTGACACCAAAATGTTGATGGTCAATGACACTGGTGGCTCTCTAAAAATAGCCAAAGACATTGTAACAGAAATACTTGTTGAAAGCACTAGCAATTCTCAACGTATGATTGAAGATGAAAGACTTGTACCAAAGAACCCTGTTAATAATGCGAAAAGAATCTCTCCAGAAATAGCTAAAGTTGAAGATAATGCAACAAGGACTCTCATCAATGAAACCAGCATCTCTCCAACAAAAGCTGAAGAAACAAGAAAAGTAGAACAAGAGCAACAACCACAATGTGTTTCAGAAGCAAGAACAGAATATTGCCAAGCGCGAGGAGATATCCGAGTGCATGGAAATTCCTCTTCTGTTTATGTTGTGCCACAGAAAACAAACAGCTTGGCTGAAAACATGTCATGGATTATAAGGCCTTATGCTCGGAAGACTGATGCATTTGCAATGAGTAGTGTAAGAAAATGGTCGATTAAAGCTAGCAACCAAGTCCCACAGTGCACAAAAAATCACAGTATTCCAGCAGTAATATTCTCTACTGCAGGATACACTGGAAACCACTTCCATGAATTCAGTGACATTATCATTCCACTGTTTTTGACTTGTAAACAATTTAATGGACAAGTACAGCTTATCATAACTGATAAGATACCATGGTGGATTCCCAAACACCAAGCATTTCTTAAAAAGCTGTCCAAGTATGAGATTATGGACATTGATAAAGATGATGAAGTGCATTGCTTCCCTAAGGTGATTGTTGGGCTTAAAAGGTATCATAAAGAGCTAAGCATTGACCCCCAAAAGTATTCCTATTCTATCAAAGACTTCAGAGATTTTTTGAGAGACTCGTATTCACTAAAGAGAGTTAATGCAATCAAAATCAGAGATATTGACAATCAAATTAAGAAGCCTAAGCTCCTGATTCTTTCAAGAAAAAGATCAAGAGCCTTCACTAATATAAATCAAATAGCAAAAATGGCTAAAGGGTTGGGTTTCAAAGTAATTGTTATGGAAGCAGGGCAGAACATGTGGAGTATTGCAAATGTTGTGAACTCTTGTGATGTACTAATGGGTGTTCATGGTGCTGGTCTTACTAACATACTTTTCCTTCCTGAAAATGCAATTTTCATTCAAGTTGTGCCGTATGGTGGGACGCAAGTGGATTGGCTTGCCACAAATGATTTCGCAAAGCCCTCAGAGGATATGAATATAAAGTACTTGGAATATAAAATAAAGTTGGAAGAAAGCACTCTTATACAACAATATCCGTTAGACCATATGATTATAAAGGATCCCTCATCAATAGTAAAACAGGGATGGGAAGCCTTTAGGTCAGTGTATTTTGACAAACAAAATGTAAAGCTTGATGTTAATAGATTTAGACCAACATTACAGAGAGCCCTCGAGCTATTGCACCAATAA 1581 0.3744 MIYNTIFAKSFSRYEQKKLGYGAFVGFLLIVLSLCTVFKPYLVPTHDLNLKLSIGADTKMLMVNDTGGSLKIAKDIVTEILVESTSNSQRMIEDERLVPKNPVNNAKRISPEIAKVEDNATRTLINETSISPTKAEETRKVEQEQQPQCVSEARTEYCQARGDIRVHGNSSSVYVVPQKTNSLAENMSWIIRPYARKTDAFAMSSVRKWSIKASNQVPQCTKNHSIPAVIFSTAGYTGNHFHEFSDIIIPLFLTCKQFNGQVQLIITDKIPWWIPKHQAFLKKLSKYEIMDIDKDDEVHCFPKVIVGLKRYHKELSIDPQKYSYSIKDFRDFLRDSYSLKRVNAIKIRDIDNQIKKPKLLILSRKRSRAFTNINQIAKMAKGLGFKVIVMEAGQNMWSIANVVNSCDVLMGVHGAGLTNILFLPENAIFIQVVPYGGTQVDWLATNDFAKPSEDMNIKYLEYKIKLEESTLIQQYPLDHMIIKDPSSIVKQGWEAFRSVYFDKQNVKLDVNRFRPTLQRALELLHQ 526
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g06540 526 Pfam Glycosyltransferase 61 327 427 IPR007657 GO:0016757
Vivi5g06540 526 PANTHER GLYCOSYLTRANSFERASE 18 524 IPR007657 GO:0016757
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g06540 Vivi-Chr5 172227982 172231020 Dispersed/Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g06540 - - cam:101508368 801.201
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi5g06540 5 172227982 172231020 Vivi5g06540 5 172227982 172231020 ECH