Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g06530 ATGGGAGATCGAAGCAACGGTGACGTTCTGATGCTGGAGGCTCCACCTTCTTACGGTAGTAGGTCAACCAATTCCGACGCCGAAATCATCGACGCATTACCTTACATCGACGACGACTACAGTGACCCTAGGGTCAAAATCGAAGTCGACCGTCTCGTCGAAGAAGAGATGCGCCGTAGCTCCAAGAAACCCGCTGATTTCCTCAAAGATTTTCCACCTCTTCCTACTTTCAATTTTCAGGAGTATCCAATGATTGGGAGAGAGTATGAGCGTGTGAGAGCTGGTAGGCCTCCTATTTCTCTTGATAGGTCGAGATATGAATTAGAACTGCCACCAATCAATAAAAGGAACGATGAAACTGCTTGGAAATTAGCTCTTCAAAGAGCTCAACGACTACTTCAATATCAAACTATGAGGATGGAAAATTTGGATTTGTTGTTGAAATATGGTCCTGATGCCTGGAAACAGCACAACTTGCGATTGGAAGTATACTTGTCAAGAATGCAGAAATTAGCTCAGGAACAAAATGAAAAGATTGAAAAAGTTAATCGTGAAAGGAAATATCATCAGCAAAACACTGCGTATGAGCTTAATGCTTTGTCCATCCAATGGAATGAGCTCTGTCTGAAAAATATAAACATCAGAGCTGCGTGTGCTTCAGCTGAAACTCACCTTAATGACCTGAGAAGAGAAGCAGCAGAAAGAGGATGGAACTTGGATGCTCTCACTGAAAATGGGCAATATGCCAATACGGCATCATGA 762 0.4304 MGDRSNGDVLMLEAPPSYGSRSTNSDAEIIDALPYIDDDYSDPRVKIEVDRLVEEEMRRSSKKPADFLKDFPPLPTFNFQEYPMIGREYERVRAGRPPISLDRSRYELELPPINKRNDETAWKLALQRAQRLLQYQTMRMENLDLLLKYGPDAWKQHNLRLEVYLSRMQKLAQEQNEKIEKVNRERKYHQQNTAYELNALSIQWNELCLKNINIRAACASAETHLNDLRREAAERGWNLDALTENGQYANTAS 253
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g06530 253 Coils Coil 165 192 - -
Vivi5g06530 253 MobiDBLite consensus disorder prediction 1 25 - -
Vivi5g06530 253 Pfam Breast carcinoma amplified sequence 2 (BCAS2) 28 234 IPR008409 GO:0006397
Vivi5g06530 253 PANTHER BCAS2 PROTEIN 26 232 IPR008409 GO:0006397
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g06530 K12861 - gmx:100783349 410.609
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi5g06530 5 172132976 172136717 Vivi5g06530 5 172132976 172136717 ECH