Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g06528 ATGTTCTCTGTCAGGGATTTTTGGAGGCGGCATAGGAGGAAGATTTTCATTTCTGTCGGTGTTATAGGAGGTGGCTATTGTCTGTATAACCTCTATGGTGTTCATAGGCAAAAACTCGATGGCCTTGAGAGGGAACTTCAAGTCCAGAGAGAAACTGAGGAGCGTATGAAGGATCAGATGCAAGCTCACTTTGTGAATATTCAGAGAATTTCGGATACGATTACATTACCTCATTCTATGCACAACCTAAGTTGCCGTATATCAGAAGAGTTGGATCTTTCTCACCTTCTTGAGAGGTTAATGCAGGGAAAGGGTCAGCCTAATGCTTTAACGCAATCAGAGAAACTAGATTTATGGGCTAGACTCAAGATTTTAAGTTTCACGAGAATGGCTTTGTCTGTTTGGGCAACAGTAATGCTTAGCTTGTATACAAAAGTTCAAGTCAATATACTAGGAAGGCATCTATACATTGATACTGCACGAAGCTTTGAAAGCTCTTATTTAACGGAAAGTGGAGATGTGGTTGATGGGGAGGGTCAGCAGAAATTTCTGGGAAGTGTTGATTTTCTCTCTCAACATGGTATGCCTGCCTTGATTTCGGACATGGAGGCAGCTACAAAAGAAGTTCTCAAAGGAAAGCAGTTGACTAGTCTCTTCAACAATACAGCGTTTCAAGAAACCATCACACAGATACTGAACACTTTCATGAGCAGAGGAAGTCCACTTTTCTGGGTAAAATATATGATACCTGAGGATGATAAATTACGTTCCACGACCTCTGGGAGTAATGACGTAGTTCCATTTTATATGACTGAATTTGAACAACTCATGATGGAAGCAAATGCAGTATTATCAAGTGCTGAATTTGGGAGCGTTATAGATATATCTCTGAAAGCTGTGGTGGATACACTGGCCGAGCAGATGGGGACTACAAGCGTGCCATTGGCGAGAGCATTGCCCCAAGTTGCGCAGATGTGTCCTTTGCTCCTCGAAGAACCCAGTAAAAATCAGTTCATCCAAATCATTAATAAAATACCAGAGGTTGAACTTTTTCTCACTTTCCTCTATGCAAACATGCCAAATGCAGAGAGCATAGTTCAGAGTGATTAG 1110 0.4153 MFSVRDFWRRHRRKIFISVGVIGGGYCLYNLYGVHRQKLDGLERELQVQRETEERMKDQMQAHFVNIQRISDTITLPHSMHNLSCRISEELDLSHLLERLMQGKGQPNALTQSEKLDLWARLKILSFTRMALSVWATVMLSLYTKVQVNILGRHLYIDTARSFESSYLTESGDVVDGEGQQKFLGSVDFLSQHGMPALISDMEAATKEVLKGKQLTSLFNNTAFQETITQILNTFMSRGSPLFWVKYMIPEDDKLRSTTSGSNDVVPFYMTEFEQLMMEANAVLSSAEFGSVIDISLKAVVDTLAEQMGTTSVPLARALPQVAQMCPLLLEEPSKNQFIQIINKIPEVELFLTFLYANMPNAESIVQSD 369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g06528 369 Coils Coil 39 59 - -
Vivi5g06528 369 PANTHER PEROXISOMAL BIOGENESIS FACTOR 3 1 358 IPR006966 GO:0005778|GO:0007031
Vivi5g06528 369 Pfam Peroxin-3 107 358 IPR006966 GO:0005778|GO:0007031
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g06528 Vivi-Chr5 172091624 172096301 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g06528 K13336 - gmx:100782816 543.502
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi5g06528 5 172091624 172096301 Vivi5g06528 5 172091624 172096301 ECH