Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g06523 ATGATGTCTTCCGCTGATCCTTTGGTGGTTGGTCGTGTGATTGGTGATGTTATTGACATGTTCAATCCATCTGTTTCCATGTCTGTTTACTATGGTCCTAAACATGTCACCAATGGCTGTGACATTAAGCCATCCATAGCTATCAACCAACCCAGGATCACTCTTACTGGAAATAGGACCAGCCTCTACACTCTGGTTATGACTGATCCTGATGCACCAAGTCCCAGTGAACCAAGCTTGCGCGAGTTCGTACACTGGGTTGTGGTTGACATTCCTGGAGGAACAAACCCAAAACGAGGACATGAGATTTTGTCTTACATAGGACCTAAGCCGCCAGTTGGGATTCACAGGTTCATTCTGGTTCTCTTTGAGCAGAAGGGACCTATAGGATTGCTGGAGCAGGCACCAAATCGGGTCAATTTCAACACTCGTTATTTTGCGAATCAGTGGAATCTTGGTCTTCCAGTAGCTACAGTCTACTTCAACTCTCAGAGAGAGCCTCTAACTAAGAGACGCACTTGA 522 0.4598 MMSSADPLVVGRVIGDVIDMFNPSVSMSVYYGPKHVTNGCDIKPSIAINQPRITLTGNRTSLYTLVMTDPDAPSPSEPSLREFVHWVVVDIPGGTNPKRGHEILSYIGPKPPVGIHRFILVLFEQKGPIGLLEQAPNRVNFNTRYFANQWNLGLPVATVYFNSQREPLTKRRT 173
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g06523 173 FunFam Terminal flower 1 1 172 - -
Vivi5g06523 173 SUPERFAMILY PEBP-like 3 166 IPR036610 -
Vivi5g06523 173 Gene3D - 2 172 IPR036610 -
Vivi5g06523 173 CDD PEBP_euk 25 163 IPR035810 -
Vivi5g06523 173 PANTHER PHOSPHATIDYLETHANOLAMINE-BINDING PROTEIN 11 166 IPR035810 -
Vivi5g06523 173 ProSitePatterns Phosphatidylethanolamine-binding protein family signature. 63 85 IPR001858 -
Vivi5g06523 173 Pfam Phosphatidylethanolamine-binding protein 49 161 IPR008914 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g06523 Vivi-Chr5 172014451 172016326 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g06523 - - tpra:123916894 293.893
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi5g06523 5 172014451 172016326 Vivi5g06523 5 172014451 172016326 ECH