Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g06522 ATGCTGCCAAACTTTGCAGAACCCCACACCACCTTTATTTTCCCTTTACTGTCCCTAACATTAGGGGCTACCATACCCATACCTCACCACCAATATTCCCTTCCTTCCTTTGGTTCAAGGAAAAAAAATCACTTCCACATTCTCATTCACTTCACTTCACTTCACTTGCACACCATGTTACTGACAAAATGCTTCAACCATAACCTTCTACTAAACTTGTTCATTTTCTTCATCATTCCTTATTCTATTGTGTCTCTTCCTATACCAGATGCAGCAACAGTTCAAACTGTCACAGCAAATTCATCTTCACAATCACAAGGAACTATCCCTGCTTTCCCTGAACAAGCTGATATTGCAAGATGTCCTTTATCTCTCTCTGATCAACACTTCAATGGAATCAAAAACGCATGTTCCATCAAGTCCAACAAACATGGTGGTGATTCTTATGATAAGCTTCAGCATAGCAGATGCTGTCCTGTGCTAGCTGCTTGGTTATATTCTGCATATTCTGCTACTGCTCTTGGAACTGGAAAGGTTTCTTCTGGTTTGGGACATGGACATGCTACTACTGCATCCTATGACATGCCTTTGTTGCCAGATGATTCTGAAACGTGTGAGAGTGATTTGGGAAGGGCTTTGAAAGTTAGAGGAATTGAGCTTTTTCAACCTAATGAGACTTGTGATGTGGTTTATTGTTATTGTGGGATTAGGCTTCATCCTTTGAGTTGTTCTGAATCGTTTAAGGTTACTGGTAGCGGAAATCTTGTTGGAGATGAAAATGTGAAGAGATTGGAGAGAAATTGTTTGAGTAGTAGCAATGGTGTTAATGGTTTTCCTGGTTTAGGAGGTTGCTCTAAGTGCTTGCATAGCCTCTATTTGCTTAGAAAGAAGACTTCAAATTCAAGCAAACCAGGAGACAGAACAACAAAGATCCATAACAAAGATTGTGAACTAATGGGATTAACATGGCTTTTAGCTAAGAATAGAACAGCTTATATTCACACGGTTTCTTTGGTTCTTCGCGCTTTGATGTTGAGTCCTGATGGATCTGATCCACAGTCATGCACTCTTAATAGTGATGGAATGCCTCTTGCTGTTGATTCATCTGAAATGTATGATCAATCTTCATCAAATAATCTCCAATCACCAATCTTTCATTCTTTGTTGGTTCTATGTTTTGTACTAGCTATGCATTTCATTCTATTATCTACCTAA 1215 0.3918 MLPNFAEPHTTFIFPLLSLTLGATIPIPHHQYSLPSFGSRKKNHFHILIHFTSLHLHTMLLTKCFNHNLLLNLFIFFIIPYSIVSLPIPDAATVQTVTANSSSQSQGTIPAFPEQADIARCPLSLSDQHFNGIKNACSIKSNKHGGDSYDKLQHSRCCPVLAAWLYSAYSATALGTGKVSSGLGHGHATTASYDMPLLPDDSETCESDLGRALKVRGIELFQPNETCDVVYCYCGIRLHPLSCSESFKVTGSGNLVGDENVKRLERNCLSSSNGVNGFPGLGGCSKCLHSLYLLRKKTSNSSKPGDRTTKIHNKDCELMGLTWLLAKNRTAYIHTVSLVLRALMLSPDGSDPQSCTLNSDGMPLAVDSSEMYDQSSSNNLQSPIFHSLLVLCFVLAMHFILLST 404
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g06522 404 Pfam SPARK 119 301 IPR043891 -
Vivi5g06522 404 PANTHER GPI-ANCHORED PROTEIN 68 399 IPR040376 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g06522 Vivi-Chr5 171999674 172002408 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g06522 - - vvo:131603974 817.764
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi5g06522 5 171999674 172002408 Vivi5g06522 5 171999674 172002408 ECH
Vivi5g06522 5 171999674 172002408 Vivi4g00339 4 7741859 7745198 PCT