Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g06507 ATGGGCACTGTTATTGACTCTCATTTCTTAGCCCTCACTGCCATTATCACCATTGTTTATCAGCTTCTGTTTTTCATTGTCACTGCACTTCTCAAATTCGATAAGGTCACTGATTTTGCAGGAAGTACCAATTTCGTTATTGTCGCTGTATTGACCTTAGTACTCAAAGGCTCATGGCATTTTCGACAGATAATCCTCACTCTCTTTGTTGTATTATGGGGTCTTCGCCTTGGTTTTTTTCTCTTACTCAGGATTTTACAGTGGGGAGAGGATCGCCGTTTTGATGAAATGCGTAGTAATTTGGGGAGATTGGCTGTGTTTTGGATATTTCAGGCTGTTTGGGTTTGGGCTGTGAGTTTACCTGTTACAGTGGTGAATGCAAGTGATAGGAATCCTTTTCTAAAGGCTGTGGATTTGATTGGGTGGCTTATGTGGGCTGTGGGTTTTATGTTTGAAGCTACGGCCGATCAACAAAAATTGACTTTCAAAAATTCTTCGGAAAATAGAGGGAAGTGGTGCAATGTTGGACTCTGGCAATATACTCGTCATCCTAACTATTTTGGCGAGATATTGCTTTGGTGGGGAATTTTTGTGGCATCTACACCTGTACTGAAGAAAGCTGAATGGCTAGTAATCATTGGACCGATCTTTCTCACACTGTTGCTTCTTTTCATCAGTGGCATTCCACTGCTCGAGGAATCAGCAGATAAGAAGTTTGGAAATGTGGAGGGATATAGGGTATACAAACAAAAAACCAGCCCTTTAATCCCATTGCCACCAGGAGTCTATGGAAAGTTACCTGCATGGTTCAAATCAGCTTTTCTCTTTGAATTTCCACTCTACAGTCGTAATTTTCCCTCGGAAGAACAAATTTGGTGTAGAACAAGCAGTGGGAAAAGCAGTGATACTTTGAAAATCGAGTAG 924 0.4134 MGTVIDSHFLALTAIITIVYQLLFFIVTALLKFDKVTDFAGSTNFVIVAVLTLVLKGSWHFRQIILTLFVVLWGLRLGFFLLLRILQWGEDRRFDEMRSNLGRLAVFWIFQAVWVWAVSLPVTVVNASDRNPFLKAVDLIGWLMWAVGFMFEATADQQKLTFKNSSENRGKWCNVGLWQYTRHPNYFGEILLWWGIFVASTPVLKKAEWLVIIGPIFLTLLLLFISGIPLLEESADKKFGNVEGYRVYKQKTSPLIPLPPGVYGKLPAWFKSAFLFEFPLYSRNFPSEEQIWCRTSSGKSSDTLKIE 307
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g06507 307 Gene3D - 58 258 - -
Vivi5g06507 307 ProSiteProfiles Steroid 5-alpha reductase C-terminal domain profile. 141 209 IPR001104 GO:0006629|GO:0016627
Vivi5g06507 307 PANTHER 3-OXO-5-ALPHA-STEROID 4-DEHYDROGENASE 4 283 IPR010721 -
Vivi5g06507 307 FunFam 3-oxo-5-alpha-steroid 4-dehydrogenase (DUF1295) 59 259 - -
Vivi5g06507 307 Pfam Protein of unknown function (DUF1295) 24 252 IPR010721 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g06507 Vivi-Chr5 171889384 171894112 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g06507 - - mtr:11415765 528.865
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi5g06507 5 171889384 171894112 Vivi5g06507 5 171889384 171894112 ECH