Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g06505 ATGGCGAATTGGATCTCCTCCAAACTCAAAGCCGCCGAGAACATTCTCCATCAGATCGATCAGCAAGCGGCGGAATCGCTTCGGAAGAACGACGAGAGGCTTCAATTAGAGGAACAAGCCAGTATCGATGCTCCTGTGAAACCAGGGAGCGTTGTGCCTCTGAAGGATCAATTGAAGAATCAATTGAAGAAGAAAACCCCTGAGAATAATGATTATAATGGAAAATTGCGGAGTGATCCTAATTTCAGCGTGCTTAAAAAAACTACATCACCGATTGTACCCAAGCATTCCCCCAATTCTAGTCCTACAATTACGGACGGTGATTGGACTGAACTTCTTAGTTCACCTACTCAGCCTACAGCTTCTGCTTCTGGGGGGAATCATGGTAACGGTGTACCTGCTGCTCGGTTTTTACGGCAAAATAGTAGGAAGCAGAAGGGTTCACCTGTGTCTGATGTAAAGAGGAGTCATAAAAGTGGTAGCAGTGGTTCAAGGACTTTGCAGAGATTAGACTCTGTTAAAGGAGCTAAATTGAGTGGAAAAGCCAGTGATGATGGGAAGGAATCTACCTCTCCGGGTTCGAGTGATAGGCAGTCTAATGTAGAATCGGAAACCGATGGTACTAGAGGACAGGAATATGTTAGCAATAGCAGTCCTGATAAGCCCACGACTAAGGTCAACAATAAGGAAAAGGAAGATCGTGAGCAACAATTTAATTATAGGGACTTCTCTTCACCTGAATCTTTACGGGAAGATGACAAAAATACCGCTGCAGAGGCAATACCAGTAAGGGGGGTTGATAAAGTGCGTGCAGCTAAGATCCCAGTTGATGTTGGCAGTCGTCTGAAAAATGTGATAAAAGGGAGGCGTGAGCTTAATTCAGCATCTGACAATTTAACATCCAGTGATTTGAAAAGGGGTTCTTCCATGGTAAGTGGCGAAAGTTCTGATTCAGATACAGAGTCCGGTTCAACATCTGATTCTGAAAGTGAGCATGAGAGGGAAGAAAGGAGAAAGAAGAGAGAAAGGATCCTAGCTGAGAGAGCCGCAGCTAATGCAATGATTGCTATCAAGGAAAAGGAGAATATAGTGGCCAAATTAGAGGGGGAGAAACAAAGTCTAGAGAAAATACTTGAGGAGCGAGCTAACCAACAGGCACAAGAGGCTTCACAGCTTCAGAGTACTATGATGGAAACAATGGAAGCTGTTGAGTTAGAAAAGCAAAAACATAATAATACTAGAATGGAAATTCTTACACGGTTAGCTAAACTGGAGACTGCTAATGCTGATCTTGCAAGATCCCTCGCAGCTGTACAGTGGAACCTTGAAGTAGAGGCCAAAGAAGTAGCAGAACTCAGACAAAAAATTGCATTGAAAGAATCTGTTCTCGAAGAGCTCAAAAAGAGTACGAGGAATCCTCATCAAACTGGAGCTTTACGAAATCAACTAGCTTCAAAAGGAGTTGAGTTTGAACGAGAAATTCTTGAGGCTGAGCACTCTTTTGTTAATGATAAAGTTGCACAGTTACAGGAAAAGGCAAGGAAGCTAGAAACTGACATCGAAATGACAAGGAAGGAGATAGAAGAGCCGTCGGAAGTAGAGTTTGAGCTTAAGCGAAGGCTTAATCAAATGACTGATCATTTAATACAGAAACAATCTAAGGTTGAATCACTCTCTTCGGAGAAGGCAAGCCTTACATTTAGAATTGAGGCAGTATCAAGGTTGCTGGAGGAGAACACGTCAGTGTCAGCTATGAATCCTGCCTCATCATCAAGTGACTTAGAATCTGGAATGTGGGAGCTCTCTAATTCAAAATTGAAGCCTATGCTAAAAGCCAGAATTCACTCTGGCAAAAAACAGCTAGGGTCATTGCTTCAACAATTAGATTATATTTTTGTGACTGGTGCACTTGTTTTAAAAAGGAACCCAACGGCCAAACTATGGGCTGTGATTTACCTTGTTTGCCTTCATTTGTGGGTGATTTACATTCTGACATCACATTCCGGCCCATCGGGAGAAGGTAAATCTGGTGCTGTAATCTCATTGGAGAACATCAATAACACGGGAGGAGTATGA 2076 0.4277 MANWISSKLKAAENILHQIDQQAAESLRKNDERLQLEEQASIDAPVKPGSVVPLKDQLKNQLKKKTPENNDYNGKLRSDPNFSVLKKTTSPIVPKHSPNSSPTITDGDWTELLSSPTQPTASASGGNHGNGVPAARFLRQNSRKQKGSPVSDVKRSHKSGSSGSRTLQRLDSVKGAKLSGKASDDGKESTSPGSSDRQSNVESETDGTRGQEYVSNSSPDKPTTKVNNKEKEDREQQFNYRDFSSPESLREDDKNTAAEAIPVRGVDKVRAAKIPVDVGSRLKNVIKGRRELNSASDNLTSSDLKRGSSMVSGESSDSDTESGSTSDSESEHEREERRKKRERILAERAAANAMIAIKEKENIVAKLEGEKQSLEKILEERANQQAQEASQLQSTMMETMEAVELEKQKHNNTRMEILTRLAKLETANADLARSLAAVQWNLEVEAKEVAELRQKIALKESVLEELKKSTRNPHQTGALRNQLASKGVEFEREILEAEHSFVNDKVAQLQEKARKLETDIEMTRKEIEEPSEVEFELKRRLNQMTDHLIQKQSKVESLSSEKASLTFRIEAVSRLLEENTSVSAMNPASSSSDLESGMWELSNSKLKPMLKARIHSGKKQLGSLLQQLDYIFVTGALVLKRNPTAKLWAVIYLVCLHLWVIYILTSHSGPSGEGKSGAVISLENINNTGGV 691
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g06505 691 MobiDBLite consensus disorder prediction 185 223 - -
Vivi5g06505 691 Coils Coil 9 29 - -
Vivi5g06505 691 Pfam Golgin subfamily A member 5 485 665 IPR019177 GO:0007030
Vivi5g06505 691 MobiDBLite consensus disorder prediction 291 323 - -
Vivi5g06505 691 MobiDBLite consensus disorder prediction 38 342 - -
Vivi5g06505 691 MobiDBLite consensus disorder prediction 325 342 - -
Vivi5g06505 691 MobiDBLite consensus disorder prediction 58 72 - -
Vivi5g06505 691 Coils Coil 492 526 - -
Vivi5g06505 691 MobiDBLite consensus disorder prediction 154 169 - -
Vivi5g06505 691 Coils Coil 350 395 - -
Vivi5g06505 691 MobiDBLite consensus disorder prediction 224 258 - -
Vivi5g06505 691 Coils Coil 435 469 - -
Vivi5g06505 691 PANTHER GOLGIN-84 1 673 IPR019177 GO:0007030
Vivi5g06505 691 MobiDBLite consensus disorder prediction 73 127 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g06505 - - pvu:PHAVU_002G329100g 841.262
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi5g06505 5 171874062 171881159 Vivi5g06505 5 171874062 171881159 ECH