Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g06480 ATGTTAGATCCAGCACAGTCTTCTTCACCCACCAACTCTTCCATCTCCTCCTCTGATCTTGACACTCAGTCTACGGGATCATTCTTCCATGACAGAAGCACCACATTAGGCACTCTCATCGGTCTCACCTTCAGAGCCCCACCTCACAACACGAACTCACCTTCCGCCGTTGAACCCTCTCGGAGGGCCGTCAAGTCAAAGAGGAACATAAATTCCAACGCCGCGGATTTCGTGGTTTCCAAGCGCCGGAGGAGGTGGTGGAACTTTTGCAGTCACGGCGATTCAAGGTCGGCTTCGCTGGGTGAGTTTCTGGAAGTTGAAAGGCGTTTCGGCGATGCTGTTTTTTATGAAACGGCTGCGGAGTTGGAAGGATTGGTGGTGGATTCACCGCAACAGAGGAGCAGCGGAAGGGCGTTGTTTGCCGACGGGAGAATTCTTCCGCCGTCCGATGTTGAGGAAAGATCGTCCACGGCGGGAAGTCTTTGCGGTAGATTTCCGGTTTCGATTACCGGGATCTGTAGCAGTGGTGCTGGATGA 537 0.5345 MLDPAQSSSPTNSSISSSDLDTQSTGSFFHDRSTTLGTLIGLTFRAPPHNTNSPSAVEPSRRAVKSKRNINSNAADFVVSKRRRRWWNFCSHGDSRSASLGEFLEVERRFGDAVFYETAAELEGLVVDSPQQRSSGRALFADGRILPPSDVEERSSTAGSLCGRFPVSITGICSSGAG 178
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g06480 178 PANTHER - 8 174 IPR040344 -
Vivi5g06480 178 MobiDBLite consensus disorder prediction 1 27 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g06480 Vivi-Chr5 171448806 171449782 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g06480 - - vvo:131603948 340.502
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi5g06480 5 171448806 171449782 Vivi5g06480 5 171448806 171449782 ECH
Vivi5g06480 5 171448806 171449782 Vivi4g00367 4 8272448 8273618 PCT