Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g06095 ATGGCGATCTCATCACAATCTTTCTCACCTTCCTTCATCTTAACTCGCACCGATTCAACTCGTCCAACTCGTCTTCCCTCTCGATTCACCTCCACTCACTTCCGCAAACCCCAAACCCGCTCTTCCTCCCCTCGATTCATCGCTTCTTCGCGTCTCAACTCGTCTAAATCCTCCGACGCCGGCGGTTCTATTTCTCCGGACAACGGCGACGTCACCTACGAGCTCCACCACGATCTCTCGCCGCAGCGGCGGAGACGCGGATCGCCGGTTTTCGTGACGCTGCCGGTGAAATCTGTGGGGAGGGAAGGGAAGATATGGAGGCCGAAGGCGATGATGCTGTCGTTAAAGGCGTTGGCGGCGGCGGGTGTGGAAGGGGTTGTGGTGGAGATTTGGTGGGGGGTGGTTGAGAGGAATGAGCCTAGGGTTTATGATTGGCGAGGGTATCGGGAGCTTGTTATGATGGCTTGCATGTGTGGACTCAAAGTTCGTGCTGTTCTTGCGTTTCATCAACATGGCACAGACGGTGATGATCTTAATGGGATACCACTTCCTTTATGGGTGCTTGATGAGATACAAAAGGATCCGGATTTAGCATTTTCTGATAGGTTTGGAAGAAGAAATACTGAATATATTTCTCTCGGGTGTGATACTCTTCCTGTGCTGCGCGGGCGTTCTCCCATTCAAGTATATGCAGATTTTATGAGGGATTTCAGGGACACTTTTAGGCCTTTTCTTGGCACTATCATTACAGGAGTACAGATTGGGATGGGTCCTGGTGGTGAACTAAGATACCCTTCATTGTCATTACAAAAGCTAAATTTGGCTTGGTCTCGCGAACTTGGAGAGTTTCAGTGCTATGATAAGTATATGCTTGCTTCTCTAAACGCCTCTGCAAGAAATATTGGAAAGCGTGAATGGGGAAATGGCGGTCCATCTGGTGCTGGAAGTTTGATCCAAAATCCTGAGCGTACTGAATTCTTTAGAAATGAAGGTGGCTCTTGGAACATGCCATATGGTAAATTTTTCCTCGAATGGTACTCAGATATGCTACTACTGCATGGAGAGAGAATTTGTAGGGAAGCTGAAACTATATTTAGGGGCACAGAAGTCCACATATCAGCAAAATTGGCTGCCATTCACTGGCACTATGTCACACAATCCCATCCATCGGAGGTAACAGCAGGCTATTATAATACTTTTAACAGGGACGGATACATACCAATTTTACGCATGTTTAGTAAATACGGATTCTCGATGTGCTGCTCTTGTTTTGAAATGCAAGATATAGTTATGAAGAAGATCAACCCAGATTGTAGCCCCGAAGGTTTTCTTAGACAACTTTTGCTGGATGCTAGGCTCTGTGACATATCACTTGAAGGCCAAAATTTTTCAACCGATTTGGATGATGATGGATTCTCTCAGGTGCTAAAGATGTCAAAATATTACTCAGATGGCATCGAGAGACGCCCCTTCTCATTCAACTTTGTAAGAATGGACAAAAATATGTTTGAACCCCGAAATTGGGACCGGTTTACTCGATTTGTGAGACGAATGTCTGATGGAAACATGTTTCGAGCCCGATTAAATTCTGTAGGAAACCTACGGTTGAAAACTACAGTGGCTGCACAAGTTGGATTGTTATACCAGCTTTACCAGTACTCTTGA 1665 0.4595 MAISSQSFSPSFILTRTDSTRPTRLPSRFTSTHFRKPQTRSSSPRFIASSRLNSSKSSDAGGSISPDNGDVTYELHHDLSPQRRRRGSPVFVTLPVKSVGREGKIWRPKAMMLSLKALAAAGVEGVVVEIWWGVVERNEPRVYDWRGYRELVMMACMCGLKVRAVLAFHQHGTDGDDLNGIPLPLWVLDEIQKDPDLAFSDRFGRRNTEYISLGCDTLPVLRGRSPIQVYADFMRDFRDTFRPFLGTIITGVQIGMGPGGELRYPSLSLQKLNLAWSRELGEFQCYDKYMLASLNASARNIGKREWGNGGPSGAGSLIQNPERTEFFRNEGGSWNMPYGKFFLEWYSDMLLLHGERICREAETIFRGTEVHISAKLAAIHWHYVTQSHPSEVTAGYYNTFNRDGYIPILRMFSKYGFSMCCSCFEMQDIVMKKINPDCSPEGFLRQLLLDARLCDISLEGQNFSTDLDDDGFSQVLKMSKYYSDGIERRPFSFNFVRMDKNMFEPRNWDRFTRFVRRMSDGNMFRARLNSVGNLRLKTTVAAQVGLLYQLYQYS 554
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g06095 554 SUPERFAMILY (Trans)glycosidases 87 542 IPR017853 -
Vivi5g06095 554 MobiDBLite consensus disorder prediction 14 84 - -
Vivi5g06095 554 PANTHER BETA-AMYLASE 1, CHLOROPLASTIC 38 525 IPR001554 GO:0000272|GO:0016161
Vivi5g06095 554 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 405 428 IPR001554 GO:0000272|GO:0016161
Vivi5g06095 554 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 143 161 IPR001554 GO:0000272|GO:0016161
Vivi5g06095 554 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 257 279 IPR001554 GO:0000272|GO:0016161
Vivi5g06095 554 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 165 186 IPR001554 GO:0000272|GO:0016161
Vivi5g06095 554 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 334 353 IPR001554 GO:0000272|GO:0016161
Vivi5g06095 554 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 387 398 IPR001554 GO:0000272|GO:0016161
Vivi5g06095 554 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 122 136 IPR001554 GO:0000272|GO:0016161
Vivi5g06095 554 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 370 386 IPR001554 GO:0000272|GO:0016161
Vivi5g06095 554 MobiDBLite consensus disorder prediction 14 65 - -
Vivi5g06095 554 Pfam Glycosyl hydrolase family 14 91 514 IPR001554 GO:0000272|GO:0016161
Vivi5g06095 554 Gene3D Glycosidases 80 544 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g06095 Vivi-Chr5 166086375 166090340 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi5g06095 73 525 Glycoside Hydrolase AT4G17090 48.578 1.10e-152 447
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g06095 K01177 - gmx:100805981 874.389
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi5g06095 5 166086375 166090340 Vivi5g06095 5 166086375 166090340 ECH