Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g06093 ATGACTGCAGCAGCAGCACATATTGCTCGAACAGTTGTTGGTATTATAGGAAATATCATCTCAGGCTTCTTGTTCTTGTCACCAGTGCCAACTTTTTATGGGATATGGAAGAAAGGATCAGTTGAGCAATTTTCACCAGCACCATACTTAGCAACACTTGTGAACTGCATGGTGTGGACACTATATGGTCTGCCCATGGTGAACCCGGACAATATCTTAGTGCTGACCATCAACGGCTCGGGTTCTGTGGTCGAGATCGTATATGTCACACTCTTCATAATTTACTCTAACCGCAACAAAAGGCTCAAGGTTCTTTTGTGGCTAATTGTTGAACTCCTTTTCATTGGAGCTCTTGCGTTCGTCACATTGATTCTCGTTCATTCTGCCAAGAAACGATCGGCCATTGTTGGTACCACCTGCATTGTCTTCAACATTATGATGTATGCTGCACCTTTAGCTGTCATGAAATTGGTGATTGTGACTAAAAGCGTTGAGTATATGCCGCTTTCTATATCTCTTGCTTCCTTTGGAAATGGTGTCGCTTGGACCACTTATGCTCTCATCCAATTCGACGCATTCATCACTGTGCCAAATGGGATTGGGACATTGTTTTCCGTGGTTCAGCTGATTCTATATGCAACCTATTACAAATCGACGAAGATGCAGATAGCGGAAAGAAAAGCCAACAAGACGGAGGTGGATCTGTCGCAGGTTGTGGTTGGCAATGGTGATCAAAAATCCAAGACAAATCATTGA 756 0.4339 MTAAAAHIARTVVGIIGNIISGFLFLSPVPTFYGIWKKGSVEQFSPAPYLATLVNCMVWTLYGLPMVNPDNILVLTINGSGSVVEIVYVTLFIIYSNRNKRLKVLLWLIVELLFIGALAFVTLILVHSAKKRSAIVGTTCIVFNIMMYAAPLAVMKLVIVTKSVEYMPLSISLASFGNGVAWTTYALIQFDAFITVPNGIGTLFSVVQLILYATYYKSTKMQIAERKANKTEVDLSQVVVGNGDQKSKTNH 251
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g06093 251 PANTHER RAG1-ACTIVATING PROTEIN 1 15 226 IPR047664 -
Vivi5g06093 251 Gene3D - 126 221 - -
Vivi5g06093 251 Gene3D - 8 102 - -
Vivi5g06093 251 FunFam Bidirectional sugar transporter SWEET 132 225 - -
Vivi5g06093 251 FunFam Bidirectional sugar transporter SWEET 11 101 - -
Vivi5g06093 251 Pfam Sugar efflux transporter for intercellular exchange 135 219 IPR004316 GO:0016020
Vivi5g06093 251 Pfam Sugar efflux transporter for intercellular exchange 12 99 IPR004316 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g06093 Vivi-Chr5 166014594 166018888 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi5g06093 1 251 Miscellaneous Gene Families AT4G10850 53.360 2.36e-90 266
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g06093 K15382 - gmx:113000740 355.91
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi5g06093 5 166014594 166018888 Vivi5g06093 5 166014594 166018888 ECH