Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g06090 ATGGCATCAATGGCAACATCCTCTTCACTCAATTCAATTCCTCTTTCATCTTCTTCCTCTCTTTCCGCTCCTTCCATTCGTGCATTCTCTGAATCCAATTTCCACTTTCCCCAAAACAGAAACCACCATTCCAACCTCACCGTTAAAGCACAAACCCTAGATTTTACCAGTTCGTTCTTCGAAGGCGGATTCGGTTCAGGCGATGATCCGTTTTCTCCAGCAATCGGTTTTCCTGCCGTTGAAGAGAAACCGGAACCACAATGCCCGCCCGGACTTAGGCAGTACGAAACTATGGTGGTTTTGAGACCTGATATGTCTGAAGATGAGCGTCTTGCACTCACTCAGAAATACGAAGAGCTTCTTGTTGCTGGAGGTGGCATGTATGTAGAGGTTTTTAACAGGGGTATTATTCCACTATCGTATAGCATCCAGAAAAAAAACAAGGAAGGAGAAACTAACACCTATATGGACGGCATCTACCTCTTATTCACCTACTTCACAAAGCCCGAGTCCTTAAAAGCCCTTGAGCAGACACTATTGGCGGACGATAATGTTGTCCGATCAACGAGCTTCAAGATCATCAAGAAAAAGAAAGATAAGTGA 603 0.4444 MASMATSSSLNSIPLSSSSSLSAPSIRAFSESNFHFPQNRNHHSNLTVKAQTLDFTSSFFEGGFGSGDDPFSPAIGFPAVEEKPEPQCPPGLRQYETMVVLRPDMSEDERLALTQKYEELLVAGGGMYVEVFNRGIIPLSYSIQKKNKEGETNTYMDGIYLLFTYFTKPESLKALEQTLLADDNVVRSTSFKIIKKKKDK 200
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g06090 200 MobiDBLite consensus disorder prediction 1 21 - -
Vivi5g06090 200 Hamap 30S ribosomal protein S6 [rpsF]. 92 195 IPR020814 GO:0003735|GO:0005840|GO:0006412|GO:0019843
Vivi5g06090 200 PANTHER MITOCHONDRIAL 28S RIBOSOMAL PROTEIN S6 83 198 IPR000529 GO:0003735|GO:0005840|GO:0006412|GO:0019843
Vivi5g06090 200 SUPERFAMILY Ribosomal protein S6 92 193 IPR035980 GO:0003735|GO:0005840|GO:0006412|GO:0019843
Vivi5g06090 200 Pfam Ribosomal protein S6 94 192 IPR000529 GO:0003735|GO:0005840|GO:0006412|GO:0019843
Vivi5g06090 200 Gene3D - 91 200 IPR014717 -
Vivi5g06090 200 FunFam 30S ribosomal protein S6 alpha, chloroplastic 91 199 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g06090 K02990 - gmx:100305490 244.202
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi5g06090 5 166003046 166005459 Vivi5g06090 5 166003046 166005459 ECH