Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g06086 ATGGGTTGCGCATCTTCCAAACATATCGACGGCAAAGCAGTCGCCGTATACCAGCCACCACCGACGAGCTTCGCCGTGTTCGACATAAACTCCATCGAAGAACCATGGCTCAAACACCTCAACGACAACACCAACACCATGTCTCAAGAAAACAAACCCGCTCTCCCTCAACCAATCCTCCACATCCTCGACGCCACCGAGAAATCTCCCCAATCATGGGAAGACGTCAGTAAAACTCTCCAACATCTCAAACCTATTGTTCAACAAGAAAAACCTCCACAAACACCACCGCAACAATCACCATCAAAACCTCTGCCCAAGGTTGCTTCCTTCCGAACACTCGAAGAGTTAGATGCGAAACAAAGCCCGGAGAATAACAAGAACGAGGCACAAACCAAATCAACTACGAAAACCGAGGTTGATGTTGATGGTGATAGATTGAGAACGATAAAATTAAAACCTACTTTGTCTTCGAAACTGAAGAACAACATATTCATACAGAAAGATTTGTTAGACAAACAAAAAGAAGAGAGAGAATCGAATTTCGAACGGTTGAGGAGGGATCCACTGAGTAACTACCCGGAGAAAGTTCCACCAAACGGAAACGACGCCGTTGTGATATACACGACGTCGTTAAGAGGAGTTAGAAAAACGTTTGATAACTGTAACAAAGCGAGAGATTTATTGGAGAATCACAGGGTGATATTCGACGAGCGTGACGTGGCACTTCACGGAGAGTTTTTGAAGGAAGTGAAAGAGTTGTTGTTGACGGAGGAGGAGTCAGGGGTTGGGGTGGTTTTGCCGAGGGTGTTTGTGAAAGGGAGGTATTTGGGGGGGTTGGATGAGTTAACGGAGTTAAATGAAACGGGGAGGCTTGGGAGGATATTGAATGCGACTCGTGTGGAGAGAGGCGTTGGGAGACAAGGATGTGGTGGGTGTGGTGGGGCTAGGTTTGTTCCTTGTTTGGATTGTGGTGGAAGCTGTAAGTTGGTGATTAGTGGGGTTGAGATAAGTGATTCTCCGGTTCAGAGATGTCCTAAGTGTAATGAGAATGGGTTAGTTCATTGTCCTGCTTGTCTTTTGATTTGA 1089 0.461 MGCASSKHIDGKAVAVYQPPPTSFAVFDINSIEEPWLKHLNDNTNTMSQENKPALPQPILHILDATEKSPQSWEDVSKTLQHLKPIVQQEKPPQTPPQQSPSKPLPKVASFRTLEELDAKQSPENNKNEAQTKSTTKTEVDVDGDRLRTIKLKPTLSSKLKNNIFIQKDLLDKQKEERESNFERLRRDPLSNYPEKVPPNGNDAVVIYTTSLRGVRKTFDNCNKARDLLENHRVIFDERDVALHGEFLKEVKELLLTEEESGVGVVLPRVFVKGRYLGGLDELTELNETGRLGRILNATRVERGVGRQGCGGCGGARFVPCLDCGGSCKLVISGVEISDSPVQRCPKCNENGLVHCPACLLI 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g06086 362 Gene3D Glutaredoxin 203 303 - -
Vivi5g06086 362 PANTHER GLUTAREDOXIN DOMAIN-CONTAINING CYSTEINE-RICH PROTEIN CG12206-RELATED 132 359 - -
Vivi5g06086 362 Pfam Glutaredoxin 205 276 IPR002109 -
Vivi5g06086 362 Coils Coil 168 188 - -
Vivi5g06086 362 MobiDBLite consensus disorder prediction 117 140 - -
Vivi5g06086 362 CDD GRX_GRX_like 204 356 - -
Vivi5g06086 362 ProSiteProfiles Glutaredoxin domain profile. 193 303 - -
Vivi5g06086 362 SUPERFAMILY Thioredoxin-like 201 297 IPR036249 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g06086 Vivi-Chr5 165951839 165953168 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g06086 K17479 - gmx:100809536 396.741
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi5g06086 5 165951839 165953168 Vivi5g06086 5 165951839 165953168 ECH