Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g06080 ATGTTCTCTCTTTTCTCCGAACCCTTCCTCCTCGCCGTCGCAGTAACCGCCCTGTGTTTCTTCCTCGCGCTCTTCTCTCTCTTTCGGCCGTTTTCCTTTCGGTTTTCTTTCGCAAGATTCACGCCGCCGTTCAACCACTGTGCTTCGTCCGATTCTGAAGATTCTGTGCCTTACTTGAACGGAAGTGTTAACGGAAGTGTTGCGGATATGATGGAGATCAGTCCTTCTCCTGCGCCGGTTGTGTTGGCTGATCGTCGTACTGGTTCGTCTATGATGGAGGAGCTTGTTCCAGAGATTACGACGCACGCGCTTAGTTATTTGGATTATCCGAGTTTGTGTCGGCTTTCGATGACTAATTCTTTGATGCGGAAGGCTGCTAATGATGATAATGCCTGGAAAGCGCTTTATCACAAGGATTTCACATTGGAACAAGGTAGCGTCAGACCAAGAAATGGGTGGAAGGCTTACTATGCTGCCACAAGAGCAATTGTGATTGTTAATACAGAATTTTTCAATATCATAAGAGACAAATCCATTCAGGCAATGAGACGTTTTTGGCTTAATGCAGATTACGTGAAATGCATCCATGCCTCAGGAGAACTTTTTTCGGGGTATAATGGAGTAATGCGGGGCTGGCAACTTGTTTTCAACTGGGAGCAAGGATTGAACTTTCAGGTTCGGGATGTACGAGCTCGAGTCTTGACTGACATGGCTTGGGTTACTATGAAAACATATGTTGACATGGATACTGTGCCGTTCTATGTAACCAATGTGTTTGAGTTCCATAATGGACGGTGGTATATGGTTCATCATCACAGTTCTGTGATGAATGGGGATGTAGATCAACAAATTATGCATGGATAA 864 0.4514 MFSLFSEPFLLAVAVTALCFFLALFSLFRPFSFRFSFARFTPPFNHCASSDSEDSVPYLNGSVNGSVADMMEISPSPAPVVLADRRTGSSMMEELVPEITTHALSYLDYPSLCRLSMTNSLMRKAANDDNAWKALYHKDFTLEQGSVRPRNGWKAYYAATRAIVIVNTEFFNIIRDKSIQAMRRFWLNADYVKCIHASGELFSGYNGVMRGWQLVFNWEQGLNFQVRDVRARVLTDMAWVTMKTYVDMDTVPFYVTNVFEFHNGRWYMVHHHSSVMNGDVDQQIMHG 287
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g06080 287 Gene3D - 162 285 - -
Vivi5g06080 287 Pfam SnoaL-like domain 166 277 IPR037401 -
Vivi5g06080 287 SUPERFAMILY F-box domain 88 188 IPR036047 GO:0005515
Vivi5g06080 287 SUPERFAMILY NTF2-like 158 276 IPR032710 -
Vivi5g06080 287 Gene3D - 82 161 - -
Vivi5g06080 287 CDD F-box_FBXL4 93 138 - -
Vivi5g06080 287 ProSiteProfiles F-box domain profile. 89 135 IPR001810 GO:0005515
Vivi5g06080 287 PANTHER F-BOX PROTEIN SKIP8 4 286 IPR044260 -
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g06080 - - cam:101493003 459.914
       

Event-related genes


Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi5g06080 5 165845420 165848925 Vivi5g06080 5 165845420 165848925 ECH