Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g06066 ATGGCCTCTGAGAGGGAAAGTTTTGACCTCTCGGGACCTTTGCACTTGACTTATGTTTTATGGGATAATCCATATCATCGAATGTCAGTTGCTGCTTGTTTGGTTCAAGGTGTTTACATTCTAGAAAGAGACCGGCAGGAAAACCGCCAAGGTTCGGAAGCCCTTGCTCCTCCTTGGTGGACATTTTTCCATTTTCAACTACTTCGTCCACTTGTAGATGATGTTGACTCTTCCATATTTGGTGCAATCTACGAGTTCAAGCCTCCATCATCTCAATCTAACGACACATTATACCGAAGTCCACGTTACGTGATTGCCTTTCGAGGGACTCTAACGAAAGCACACTCGGTTTCACGCGATGTTGAGTTAGATATCCACTTCATCCGACAGGGACTTCATCAAACCACACGCTCTAACATAGCTGTTCAAGCTGTTCGAAATACAGTTACAACTGTAGGTGATTCAAATGTTTGGTTGGCCGGACATTCCCTAGGATCAGCAATGGCGATGCTTACCGGGAAAGCCATGGCTAAGGAAGGAAACTTTATTGAATCTTTTCTTTTCAACCCTCCATTTGTATCTGCCCCACTTGAGAAGATTAAGGACGAGAGAGTAAAACATGGGATTCGATTCGCTGGCAGCGTGATAACTGCTGGACTCACCTTGGCTATGAAAGCCAAACAGCCGAAGGATTTCTCACTCGATCCATTTACCGCTTTGGCTGCCTGGGTTCCGTGTTTATTTGTGAATCCATCTGATCATTTATGTTCGGAGTATATTGGATATTTTGAACACAGGAGGAACATGGAGGATATTGGTGCAGGCGTGATTGAAAGGCTAGCAACTCAAAACTCGCTTGGTGGACTATTGATGGGTGCGTTCGGGAAGGAATATTCTGAACCGCTGCATCTGATTCCTTCAGCTTCTTTGACAGTTAATGTTGCACCTGCATCTGATTTCAAAGAAGCTCATGGGATTCATCAGTGGTGGAAACCTGACTTGAGTCTTGACTACAAGCTTTACAATTACAAATAG 1035 0.4435 MASERESFDLSGPLHLTYVLWDNPYHRMSVAACLVQGVYILERDRQENRQGSEALAPPWWTFFHFQLLRPLVDDVDSSIFGAIYEFKPPSSQSNDTLYRSPRYVIAFRGTLTKAHSVSRDVELDIHFIRQGLHQTTRSNIAVQAVRNTVTTVGDSNVWLAGHSLGSAMAMLTGKAMAKEGNFIESFLFNPPFVSAPLEKIKDERVKHGIRFAGSVITAGLTLAMKAKQPKDFSLDPFTALAAWVPCLFVNPSDHLCSEYIGYFEHRRNMEDIGAGVIERLATQNSLGGLLMGAFGKEYSEPLHLIPSASLTVNVAPASDFKEAHGIHQWWKPDLSLDYKLYNYK 344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g06066 344 Pfam Lipase (class 3) 110 181 IPR002921 GO:0006629
Vivi5g06066 344 PANTHER ALPHA/BETA-HYDROLASES SUPERFAMILY PROTEIN 5 342 - -
Vivi5g06066 344 Gene3D alpha/beta hydrolase 76 209 IPR029058 -
Vivi5g06066 344 SUPERFAMILY alpha/beta-Hydrolases 18 196 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g06066 Vivi-Chr5 165737741 165739879 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi5g06066 1 275 Acyl Lipid Metabolism Gene Families AT2G05260 59.298 5.05e-118 341
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g06066 - - tpra:123915632 648.662
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi2g03967 2 152364892 152366689 Vivi5g06066 5 165737741 165739879 PCT