Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g06033 ATGGCAAATCCACCCAAAGACACTCATCTTTCCGACGACGACGACGCCGGAGCCGCTTTCGTCCTCCAATCCAAAGGTCAATGGTGGCACGCCGGATTTCACTTAACGACGGCGATAGTTGGACCAACGATTCTGACGCTGCCGTACGCGTTCAGAGGATTAGGGTGGTGGATTGGGATGTTATGCCTAACGGTTATGGGCGTTGTGACGTTCTACTCTTATGGTCTCATGTCTAAAGTTCTTGATCACTGTGAAAACGCCGGTCGCCGTCATATTCGGTTCCGGGAACTCGCCGCCGATGTGTTAGGTTCTGGTTGGATGTTCTATTTTGTAATCTTTATTCAAACGGCTATCAACACTGGCGTAGGCGTAGGGGCTATTCTGCTTGCTGGTGAATGCCTTCAGATTGTGTACTCCAATATTGCGCCTCATGGATCATTAAAATTGTACCATTTCATAGCAATGGTGACAGTGGTAATGATAGTTCTGTCTCAGCTTCCCACTTTCCATTCCCTACGACACATCAACTTGTGTTCACTTTTTCTCAGCTTAGGCTACACCTTCCTAGTAGTTGGTGCTTGTATTCATGCAGGTACATCCAAAAATGCCCCTCCAAGGGACTATTCCTTAGAGCCCAAGAAATCCTCAAGGGCCTTCAGTGCCTTCACTGCCATCTCCATAATTGCAGCAATATTTGGGAATGGAATATTACCTGAGATACAAGCAACTCTAGCACCTCCTGCAACTGGAAAGATGATAAAAGGCCTTACTATGTGTTATGCTGTTATATTGGTGACTTTCTACTCTGCTGCGGTTTCTGGATATTGGGTATTTGGAAATAAGTCCAATTCAAATATTTTGAAGAGTTTGCTGCCAGATGAAGGACCTTCTTTGGCTCCAACTTGGGTCCTTGGACTCGCCGTCATCTTTGTTCTTCTTCAGCTCTTTGCAATTGGTTTGGTTTATTCTCAAGTTGCTTACGAGATAATGGAGAAAAAATCAGCTGACGTGAAGCAAGGGATCTTTTCCAAGAGAAATCTTCTTCCACGGATAATTCTACGAACAATTTACATGATTTTCTGTGGATTTATAGCAGCCATGTTGCCATTTTTCGGAGACATAAATGGCGTGGTTGGTGCTGTTGGTTTCATTCCTCTGGATTTTGTTTTGCCTATGATTCTATACAACAAAACACACAAGCCTCCAAAATCATCATTCACTTACTTGATCAACATCTCAATCATGGTTGTATTCACTGGTGCAGGAATCATGGGTGCATTCTCTTCTATAAGAAAATTGGTTCTTGATGCCAACCAATTTAAGCTTTTTGGCAGTGATGTTGTGGATTGA 1350 0.4363 MANPPKDTHLSDDDDAGAAFVLQSKGQWWHAGFHLTTAIVGPTILTLPYAFRGLGWWIGMLCLTVMGVVTFYSYGLMSKVLDHCENAGRRHIRFRELAADVLGSGWMFYFVIFIQTAINTGVGVGAILLAGECLQIVYSNIAPHGSLKLYHFIAMVTVVMIVLSQLPTFHSLRHINLCSLFLSLGYTFLVVGACIHAGTSKNAPPRDYSLEPKKSSRAFSAFTAISIIAAIFGNGILPEIQATLAPPATGKMIKGLTMCYAVILVTFYSAAVSGYWVFGNKSNSNILKSLLPDEGPSLAPTWVLGLAVIFVLLQLFAIGLVYSQVAYEIMEKKSADVKQGIFSKRNLLPRIILRTIYMIFCGFIAAMLPFFGDINGVVGAVGFIPLDFVLPMILYNKTHKPPKSSFTYLINISIMVVFTGAGIMGAFSSIRKLVLDANQFKLFGSDVVD 449
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g06033 449 PANTHER OS05G0424000 PROTEIN-RELATED 27 417 - -
Vivi5g06033 449 Pfam Transmembrane amino acid transporter protein 25 431 IPR013057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g06033 Vivi-Chr5 165330437 165335028 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi5g06033 1 449 Organic Solute Cotransporters AT5G41800 79.515 0.0 741
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g06033 - - gmx:100815232 794.267
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi5g06033 5 165330437 165335028 Vivi5g06033 5 165330437 165335028 ECH