Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g06030 ATGGTGAAACAACGCTGGAGAGAATCTATAAAATCGCTGCTTGGAAGTCACGTTGATCCTGATAAAGAAGAGCAGCTCCGAGGAACTAAAACAGAATTTGACGAGAAAGTGAGAAAGGTATTGAAACTTATTAAAGATGACGACAACCTTGAAGAGGATGGTACCCCAGCTGATAATTTGAAGAGGGGACAACTTGCTGATCTGATTGAGGATTTCCACGGTCAATACCAATCGCTTTATACAAAGTATGATCATCTGACAGGCGAGTTAAAGAAAAAAATCAAGGGCAAGCGAGAAAAGGGAAGTTCTTCATCTAGTTCTTCATCTAGCTCTGGCTCGGATTCAGATTATTCTTCAAAGAACCGAGACAGCAAAAATGGACAACTACAAAATGAATTTCAAAAGATAAATGATGGATTAAAACAAGAACTTGAAGTGGTGCACAAGGAAGTAGCTGAGTTAAATCAGAAGTTGACAATTACACATCAAGAGAAGGAGGAAATAAATTCAAAACACGAAGCAGCACTGAACAAATTACAAGAAGCAGACAAAATTAATTTGGGTTTGAAAACTGATGCTGATACATTAGAGATTCAAAGATCAAAACTCTTGGCGGAGAATACTGAACTGAATAAGCAATTGGACAGTGCTGGAAAAGTAGAAGCTGAACTGAGTCAAAGATTGGAGGATATGAAGACAGAAAACAATAGCCTGGCCAAGGAGAAAGAGACAGCTCTCCAACAGATTGCCGAGGAAAAGAAGATTACAGCTGACCTGAGAAACCTCATTGATGAGCTGAAAGATGATAAGTTGGTGGTTGCGAAAGAATTACAAACAGTAACAGATGAACTTTCTATTCTGAAGCAGGAAATGAAACACTCAGAACAGCAAATAACAGCTATAAGCAAAAATCTGGAGGTCTCAAAAGAAGAAAATGAATCACTAAAAGCCGAACTTTCACAGGCTTCAAATGAGGTTCAGCTGTCTCAAAGCAGAATACAAGAATTTCTAGCTGAATCAAGTCAGTTAAAGGAGAAACTTGATGAGAGAGAAAGAGAAGTTTCAACCCTTACTCAAATGCATGAAGGGCATCAGAATGAGTCCTCAAATCAAATCAATGAACTAGAAGCACAAATCTCAAATCTGGGGCTGGAACTAGAGTCACTGCGAAACCAGAAAAGAGATATAGAGGGTCAATTTCTAGCTGAATCAAGTCAGTTAAAGGAGAAACTTGATGAGAGAGAAAGAGAAGTTTCAACCCTCACTCAAATGCACGAAGGGCATCAGAATGAGTCCTCAAATCAAATCAAGGAACTAGAAGCACAAATCTCAAATCTGGGGCTGGAGCTAGAGTCACTGCGAAACCAGAAAAGAGATATAGAGGATAAATTTCTAACTGAATCAAGTCAGTTAAAGGAGAAACTTGATGAGAGAGAAAGAGAAGTTTCAACCCTCACTCAAATGCATGAAGGGCATCAGAATGAGTCCTCAAATCAAATCAAGGAACTAGAAGCACAAATCTCAAATCTGGGACTGGAACTAGAGTCACTGCGAAACCAGAAAAGAGATATAGAGGAGAAACTTGAGAGCTTTACCACAGAAGCAAGGGAACTGGGAGATCACAATTTAGGGTTGCAAAACCAAATTTCAGAACTTGAAACGAAGTCCAAAGAAAGAGAAGAGGAACTATCTGCTATAATGAAGAAACTTAAAGATAATGAGAATGAATCATCTTCTAAAGTATCAGATTTGACATCTCAGATAACCAATTTGCAGGCTGATATAACCTCATTACACGCTCAGAAGAATGAACAGGACGAGCAAATAGTTTTTAGAAGTAATGAAGCTTCAACTCGAATCGAAAGCCTTACAAATGAGTTGAAGGTATTGCAGCAGGAAGTGGAGTCTCTACAACACCAGAAATCTGACATAGAAGTTCAGCTCGAGGAAAAAAGCCGAGCAAATTCCGAGTATGCGATTCAAGTTCAAAGTCTGAAAGAGGAGGTTGACAGAAAAACTCTAGAACAAGAGAGGCTTATGGAAGACAGAGAAACTTTAACCACAGAAGCAAAAGAACTGGGAGAGCAGATTTTACGGTTGCAAAACCAAATTTCGGAACTTGAAACGAAGTCCAAAAAAAGAGAAGAGGAACTATCTGCTATAATGAAGAAACTCAAAGATAATGAGGAGGAATCATCTTCCAAAATATCAGATTTGACATCTCAGATAAACAATTTGCAGGCTGATATAAGCTCGCTACATGCTCAGAAAAATGAACAGGAAGAGCAAATAATTTTTAGAAGTAATGAAGCATCAACTCAAATCGAAAGCATAACAAATGAGATGAACGTATTGCAGCAGGAAGTGGAGTCTCTACAACACCAGAAATCTGACTTGGAAGTTCAGCTCGAGGAAAAAAGCCGAGAAAATTCAGAATGCTTGATTCAAGTTCAAAGTCTGAAAGAAGAGGTTGGCAGTAAATCTCTGGAGCAAGAGAGGCTTATGGAAGATAGAGAAAATTTAACCACAAAAGCAAAAGAACTGGGAGAGCACAATTTAGGGTTGCAAAATCAAATTTCAGAACTTGAGACGAAGTCCAAAGAAAGAGAAAAGGAACTGTCTGCTATAATGAAGAAACTCAAAGATAATGAGGATGAATCATCTTCCAGAATATCAGATTTGACTTCTCAGATAAACAATTTGCAGGCTGATATAAGCTCATTACTTGCTCAGAAAAATGAACTGGAAGAACAAATAGTTTTTAGAAGTAATGAAGCGTCAACTCGAATCGAGAGCAAAACAGATGAGATAAATGTATTGCAGAAGGAAGTGGAGTCTCTACAACACCAGAAATCTGACTTGGAAGTTCAGCTTGTGGAAAAAAGCCGAGAAAATTCCGAGTGCTTGATTCAAGTTCAAAGTTTGAAAGAAGAGGTTGACAGAAAAACCCTGGAACAAGAGAAACTTATGGAACACAGAGAAAACTTAACCACAGAGGCAAGGGAGCTGGGAGAGCATCATGCAGGGTTGCGAAACCAATATTCTGAACTAGAAATAAGGTCCAAAGAACGAGAAGAGGAGCTATCTGCTCTCATGAAGAAACTCAAAGATAATGAGGAAGAATCATCTTCCAAAATATCAGATTTGACATCTCAAATAAACAATTTGCTGGCTGATATAAGCTCATTACATGGTCAGAAAAACGAACTGGAAAAAGACTTGCTTTTCTCGCAGAAAACAAAAGAAGAATTGGAGCTCTACTGCAAAGAAATAAAAGAAGAACATGCAGAAACCCTCTCAGTGGTTGAGAATGAAAAGACCAAATTAGCCAACCAAAATATGGATCTTCAGAGAACATTGGAAGAATGTGAAGATGCATATCAGAAGTTAAATGAAGAATATAAAAAGGTTGACAGTTGGTTTAATGAATGCAAGGCCAAACTTGAAGTTGCAGAGAGGAAGATGGAAGAAATGGCAGAAGAGTTTCGTGAGGGCATTGGGTCAAAAGATCATATAGTAGGTGATTTGGAACACCAAGTTGAAGACCTGAAAAGAGACTTGGAAGAAAAAGGAGATGAGATCAGCAATTTGCTTGAGAATGTGAGGAATCTTGAGGTAAAGCTTCGCATGTCAAACCAAAAGCTCCGGGTCACAGAACAATTGCAAAATGAAAATGAAGAAAAGTTTAAGCAAAAACAGAGTGCACTTGAAGATAGGATTGCTACATTGGCAGCAACAATCACAGCTAACAATGAAGCTTTTCATGAAACTATCACAACTATTAAAAAGTCTGTCAACAGTGTGATATCTGGAATAGATACTGTGAGCAGAAAATTTTCGGACGAAAGCAAAAATCACGAGAACAGCATCTCAAACATCTCACACGAGCTTCAGGTTGCAAAAGAATATGTTTGCGAGATCAATAGGGTTAAGGGGAAGTTAGAGAAAGATAAAAACCATTTGTTGGAGGAGTTGAAGGGTAAAAAGGAAGAGGAATTAACTCTGTTGGAGGAGTTGAAGGGTAAAAAGGAAGAGGAATTAATTTTGAGGGAGAAGGTTGGGAAGCTAGAGGCAAAGGCAAGAAAGGATGAATCAGAGAATATCAGTGTGAACGCAACTGTTGTTGAACTTAAGAAGACAGTTGAAGATCTAGAGAAGTTGATCAAAGAGAAAGAGGAAGGTTTGGGAGAGGAAAAGAGGGAGGCCATTAGGCAGCTCTGTTTGTGGATTGATTATCACAGGGAGCGTAATGACTATCTCAAGGAAATCCTATCAAAAACTCGCAGGTTCCAGAGAGCAGCAGTGTAG 4308 0.3863 MVKQRWRESIKSLLGSHVDPDKEEQLRGTKTEFDEKVRKVLKLIKDDDNLEEDGTPADNLKRGQLADLIEDFHGQYQSLYTKYDHLTGELKKKIKGKREKGSSSSSSSSSSGSDSDYSSKNRDSKNGQLQNEFQKINDGLKQELEVVHKEVAELNQKLTITHQEKEEINSKHEAALNKLQEADKINLGLKTDADTLEIQRSKLLAENTELNKQLDSAGKVEAELSQRLEDMKTENNSLAKEKETALQQIAEEKKITADLRNLIDELKDDKLVVAKELQTVTDELSILKQEMKHSEQQITAISKNLEVSKEENESLKAELSQASNEVQLSQSRIQEFLAESSQLKEKLDEREREVSTLTQMHEGHQNESSNQINELEAQISNLGLELESLRNQKRDIEGQFLAESSQLKEKLDEREREVSTLTQMHEGHQNESSNQIKELEAQISNLGLELESLRNQKRDIEDKFLTESSQLKEKLDEREREVSTLTQMHEGHQNESSNQIKELEAQISNLGLELESLRNQKRDIEEKLESFTTEARELGDHNLGLQNQISELETKSKEREEELSAIMKKLKDNENESSSKVSDLTSQITNLQADITSLHAQKNEQDEQIVFRSNEASTRIESLTNELKVLQQEVESLQHQKSDIEVQLEEKSRANSEYAIQVQSLKEEVDRKTLEQERLMEDRETLTTEAKELGEQILRLQNQISELETKSKKREEELSAIMKKLKDNEEESSSKISDLTSQINNLQADISSLHAQKNEQEEQIIFRSNEASTQIESITNEMNVLQQEVESLQHQKSDLEVQLEEKSRENSECLIQVQSLKEEVGSKSLEQERLMEDRENLTTKAKELGEHNLGLQNQISELETKSKEREKELSAIMKKLKDNEDESSSRISDLTSQINNLQADISSLLAQKNELEEQIVFRSNEASTRIESKTDEINVLQKEVESLQHQKSDLEVQLVEKSRENSECLIQVQSLKEEVDRKTLEQEKLMEHRENLTTEARELGEHHAGLRNQYSELEIRSKEREEELSALMKKLKDNEEESSSKISDLTSQINNLLADISSLHGQKNELEKDLLFSQKTKEELELYCKEIKEEHAETLSVVENEKTKLANQNMDLQRTLEECEDAYQKLNEEYKKVDSWFNECKAKLEVAERKMEEMAEEFREGIGSKDHIVGDLEHQVEDLKRDLEEKGDEISNLLENVRNLEVKLRMSNQKLRVTEQLQNENEEKFKQKQSALEDRIATLAATITANNEAFHETITTIKKSVNSVISGIDTVSRKFSDESKNHENSISNISHELQVAKEYVCEINRVKGKLEKDKNHLLEELKGKKEEELTLLEELKGKKEEELILREKVGKLEAKARKDESENISVNATVVELKKTVEDLEKLIKEKEEGLGEEKREAIRQLCLWIDYHRERNDYLKEILSKTRRFQRAAV 1435
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g06030 1435 Gene3D - 889 1050 - -
Vivi5g06030 1435 Gene3D - 735 888 - -
Vivi5g06030 1435 Gene3D - 1099 1256 - -
Vivi5g06030 1435 Gene3D - 575 734 - -
Vivi5g06030 1435 Coils Coil 1173 1214 - -
Vivi5g06030 1435 ProSiteProfiles Networked (NET) actin-binding (NAB) domain profile. 10 90 IPR011684 GO:0003779
Vivi5g06030 1435 Coils Coil 1218 1238 - -
Vivi5g06030 1435 Coils Coil 277 399 - -
Vivi5g06030 1435 Coils Coil 137 185 - -
Vivi5g06030 1435 Pfam KIP1-like protein 15 84 IPR011684 GO:0003779
Vivi5g06030 1435 Coils Coil 221 269 - -
Vivi5g06030 1435 Coils Coil 581 608 - -
Vivi5g06030 1435 Coils Coil 404 463 - -
Vivi5g06030 1435 Coils Coil 468 534 - -
Vivi5g06030 1435 Coils Coil 1092 1136 - -
Vivi5g06030 1435 Coils Coil 1141 1161 - -
Vivi5g06030 1435 Coils Coil 613 763 - -
Vivi5g06030 1435 Coils Coil 768 823 - -
Vivi5g06030 1435 PANTHER COP1-INTERACTIVE PROTEIN 1 994 1073 - -
Vivi5g06030 1435 MobiDBLite consensus disorder prediction 93 128 - -
Vivi5g06030 1435 Coils Coil 1311 1346 - -
Vivi5g06030 1435 Coils Coil 831 1073 - -
Vivi5g06030 1435 Coils Coil 1374 1401 - -
Vivi5g06030 1435 Coils Coil 193 213 - -
Vivi5g06030 1435 Coils Coil 542 576 - -
Vivi5g06030 1435 MobiDBLite consensus disorder prediction 101 128 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g06030 Vivi-Chr5 165216577 165223160 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g06030 - - vvo:131603692 2555.78
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi5g06030 5 165216577 165223160 Vivi5g06030 5 165216577 165223160 ECH