Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g06002 ATGGCTTCCAAACTTCCATTACTATTAGTTTTTGTGATGTTATTTGCTCTAACTTCAGCAAATCCAAGCAAGTTCAGAAAACCATACACACCATGCAAAAACCTAGTCCTTTATTTTCATGACATACTCTACAATGGAAATAATGCAGCAAATGCAACATCAGCAATAGTAGCAGCTCCACAAGGTGCTAACTTAACAAAACTAGCACCTCAATTCAACTTTGGTAACATAGTTGTTTTTGATGACCCTATCACTTTTGATAACAACCTTCATTCAACACCAATTGGAAGAGCACAAGGGTTTTACATTTATGATACCAAAAACACATACACTTCTTGGCTTAGTTTCACATTTGCTCTTAATAGCACCTATCATGAAGGAACCATTACTTTTGCTGGAGCTGATCCAATTCTGAAGAAAACTAGAGATATTTCAGTGACTGGTGGGACTGGAGATTTCTTTATGCATAGGGGAATTGCTACTATTATGACTGATGCTTTTGAAGGTGAGGTTTATTTTCGACTTCGTGTTGATATTAAGTTCTTTGAGTGTTGGTAA 558 0.362 MASKLPLLLVFVMLFALTSANPSKFRKPYTPCKNLVLYFHDILYNGNNAANATSAIVAAPQGANLTKLAPQFNFGNIVVFDDPITFDNNLHSTPIGRAQGFYIYDTKNTYTSWLSFTFALNSTYHEGTITFAGADPILKKTRDISVTGGTGDFFMHRGIATIMTDAFEGEVYFRLRVDIKFFECW 185
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g06002 185 Pfam Dirigent-like protein 32 177 IPR004265 -
Vivi5g06002 185 Gene3D - 29 180 IPR044859 -
Vivi5g06002 185 PANTHER DIRIGENT PROTEIN 8 185 IPR004265 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g06002 Vivi-Chr5 164593617 164594443 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g06002 - - lja:Lj4g3v3002360.1 309.686
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi5g06002 5 164593617 164594443 Vivi5g06002 5 164593617 164594443 ECH