Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g06001 ATGGATACCAAAGTAACAACACTCTTTGTTTTTGTAATGTTGTTTGCTTCATGTTCAGCTATTCCAAGCAAGAAAAAGCAATACACACCATGCAAAACCATGTCCTTTTATTTTCATGACATACTTTACAATGGAAAGAATGCAGCAAATGCAACATCTGCAATAGTAGCAGCTCCACAAGGTGCTAATTTAACAAAACTAGCACCTCAATTCCACTTTGGTAACATAGTTGTTTTTGATAACCCTATCACTTTGGATAACAACCTTCATTCAAAGCCAATTGGAAGAGCACAAGGCATTTACATTTATGATAGCAAGAACACATTCACTGCTTGGTTTGGTTTCACGGTTGTTCTTAACAGCTCTAATCATGAAGGAACCATTAACTTTGCCGGTTATGACCCGGTTCTGATAAAAGTTAGAGATATCTCTGTGACTGGGGGTACTGGAGATTTCTTTATGCATAGAGGAATTGCTACTTTTACGTCTGATACATTTGAAGGTGAGGTTTATTTTCGACTTCGGGTTGATGTCAAGTTCTTTGAGTGTTGGTAA 555 0.373 MDTKVTTLFVFVMLFASCSAIPSKKKQYTPCKTMSFYFHDILYNGKNAANATSAIVAAPQGANLTKLAPQFHFGNIVVFDNPITLDNNLHSKPIGRAQGIYIYDSKNTFTAWFGFTVVLNSSNHEGTINFAGYDPVLIKVRDISVTGGTGDFFMHRGIATFTSDTFEGEVYFRLRVDVKFFECW 184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g06001 184 Pfam Dirigent-like protein 31 178 IPR004265 -
Vivi5g06001 184 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 18 - -
Vivi5g06001 184 PANTHER DIRIGENT PROTEIN 7 184 IPR004265 -
Vivi5g06001 184 Gene3D - 16 179 IPR044859 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g06001 Vivi-Chr5 164579841 164580588 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g06001 - - lja:Lj4g3v3002360.1 287.345
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi5g06001 5 164579841 164580588 Vivi5g06001 5 164579841 164580588 ECH