Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g05993 ATGTTGTTTACCTCTTCTTCTCACTCTGTCTTTTCTCGCCAATCGTTTCTTCCAATCAAGGGTTTTCTTCGTCCTCCAACACTTCGTCCTTTTCCTACAACAACCATTCGGATCTCAAATTCTCGTTTCAATTCACCAAACAACAACGTAAGTAAGAAATTGAGTATTCTGTGTTTTAGGCATGAAGAGTATCATTCTTCGGAAACGCCGAAACCTGAGATTATAGACCATTGTCTTCATGAGGAGTTGGTGCAATCTGAATCCAAGGAGTCTAGTGTCACTAAAAGGGACTGGAAGTCAATCTTTCCGAAGGTTGCAAATGAAGTATTCAATGGGATTGGTAAACGATGGGTTGTACCATGGAGTGCAATGACAATATTAAAAGTTATGCTTCTTTGGACATCAGCCTTTTGGTTTATAGGATCTTGGATGGTCCCTTTTGCAGCTCATATAACCGGATTTAGCAAGGATTCTTTGACATTCAGGGGACAGGCACTGTTTAGCCTCGTCACTGATGTAACCGAAGGGCTAGCCGGGATTGCAATTCTTATCCGATGTCTTTCACGATTCCGTCCCCTTCCACCCGATTGGTTCAAGTTTAGCCCTAAAGGGTATTGGCAATTTGACGTCGTAATGGGATGTCTCATGTTTCCCCTTGTCAATCGGCTATCTCAGTTCAACCTTGACCTACTACCTATCTTACCATCTACACAAATCACCCTTTCAAGCGTTGAACAATCGATAAAAGCAAGGGATCCCGTGGCGATGCTGTTGTATGCAATTGTAGTATCCGTCTGCGCTCCTGTGTGGGAGGAGATAGTTTTCCGTGGCTTTCTACTCCCGTCTCTCACCAAATACATGCCCGTGTGGTGTGCGATATTGGTAAGTTCGGTTGCGTTTGCGCTTGCACATTTTAACATACAGAGGATGCTGCCACTTATATTTCTTGGGATGGTGATGGGTGTAATATTTACAAGGTCAAGGAATTTATTACCATCAATGTTGTTGCATAGTCTTTGGAATGGCTTTGTCTTTTTAGATTTGATGAAATAG 1053 0.4264 MLFTSSSHSVFSRQSFLPIKGFLRPPTLRPFPTTTIRISNSRFNSPNNNVSKKLSILCFRHEEYHSSETPKPEIIDHCLHEELVQSESKESSVTKRDWKSIFPKVANEVFNGIGKRWVVPWSAMTILKVMLLWTSAFWFIGSWMVPFAAHITGFSKDSLTFRGQALFSLVTDVTEGLAGIAILIRCLSRFRPLPPDWFKFSPKGYWQFDVVMGCLMFPLVNRLSQFNLDLLPILPSTQITLSSVEQSIKARDPVAMLLYAIVVSVCAPVWEEIVFRGFLLPSLTKYMPVWCAILVSSVAFALAHFNIQRMLPLIFLGMVMGVIFTRSRNLLPSMLLHSLWNGFVFLDLMK 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g05993 350 Pfam Type II CAAX prenyl endopeptidase Rce1-like 257 342 IPR003675 GO:0004222|GO:0016020|GO:0071586
Vivi5g05993 350 PANTHER CAAX AMINO TERMINAL PROTEASE 40 345 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g05993 Vivi-Chr5 164473335 164476096 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g05993 K07052 - gmx:100816897 563.148
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi5g05993 5 164473335 164476096 Vivi5g05993 5 164473335 164476096 ECH