Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g05989 ATGGCAGATCATCAAGAGCATGAGGAAGTAAAGGGGGAATCTCTGTTGGAGAAGATTTCAGGGAAGATTCATGACCATGATTCGTCTTCGTCGTCTTCGGATTCGGACAACGAGAAGGAGAAGGAGAAGAAGAGTTCGTCGCCTGATTCGCTGAAGAATAAGGTTTATAGGCTTTTCGGAAGGGAGAAGCCGCTTCACAATGTTCTTGGCGGTGGAAAACCTGCTGATGTTTTTCTATGGAGAAATAAGAAGATATCCGCAACAACCCTTGGTGTTGCGACAGCTTTCTGGGTTCTGTTTGAGTTACTTGAATACCATCTCCTGACTTTGGTTTCTCACTTAGCGATACTTGCTCTGGCTGTGTTGTTCTTATGGTCAAACGCATCTACTTTCATCAACAAGTCTCCACCAAAGATCCCAAATGTGCACATTCCTGAGGAACCTGTTTTACAGATTGCCTCTGCTATTAGAATTGAGATCAACCGGGCTTTTACTCTCTTAAGGGAGATTGCTTCTGGAAGGGATCTCAAAAAGTTTCTCTCGGTTATTGCTGGATTATGGGTTTTGTCTATTGTTGGAAGCTGGGCCAACTTCTTGACATTGTTCTACATAGCTTTTGTTTTGCTCCACACTGTACCTGTGCTTTATGAGAAATATGAAGATCACGTTGATGCTTTTGGTGAGAAGGCACATCATGAGTTGAAGAAGCAGTATGCAGTGTTTGATGAGAAGGTTTTGAGCAAGATTCCCAAAGGACCTTTGAAAGACAAAAAGAAAGATTGA 783 0.4266 MADHQEHEEVKGESLLEKISGKIHDHDSSSSSSDSDNEKEKEKKSSSPDSLKNKVYRLFGREKPLHNVLGGGKPADVFLWRNKKISATTLGVATAFWVLFELLEYHLLTLVSHLAILALAVLFLWSNASTFINKSPPKIPNVHIPEEPVLQIASAIRIEINRAFTLLREIASGRDLKKFLSVIAGLWVLSIVGSWANFLTLFYIAFVLLHTVPVLYEKYEDHVDAFGEKAHHELKKQYAVFDEKVLSKIPKGPLKDKKKD 260
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g05989 260 ProSiteProfiles Reticulon domain profile. 74 260 IPR003388 -
Vivi5g05989 260 PANTHER RETICULON 46 250 - -
Vivi5g05989 260 Pfam Reticulon 75 229 IPR003388 -
Vivi5g05989 260 MobiDBLite consensus disorder prediction 21 49 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g05989 Vivi-Chr5 164412230 164414283 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g05989 - - gmx:100811024 378.637
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi5g05989 5 164412230 164414283 Vivi5g05989 5 164412230 164414283 ECH
Vivi5g05989 5 164412230 164414283 Vivi1g04463 1 95119746 95121936 ECH