Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g05976 ATGGCGGCACCCGAAACTCCTCTGTGTTACGTGGGTGTCTCAAGACGATCCGCCGCTTTCAATCTCATGAAGCAAATGGGATGGGAAGAAGGTGAAGGTCTTGGTAAAGATAAGCAAGGGATCAAAGGGCATGTTCGTGTCACCAACAAGCAAGACACTACTGGTATTGGATTAGAGAAGCCAAACCCGTGGGCATTTGACACTACACAATTTGATAATATACTCAAGCGATTGAAAGTGCAAGCGCCGGTTGCAAATGACGCAGATAGTAACACTGCTGAGGTGGAAACCGAGCTAGATCAGGCTGTTGCAGTTGACCCTCCTGTTTCCGTATCAAGGTCTACTAGACCACAAGGAAGATACCAGAAAAGAGAGAGAGGAAAGCGCGTCTCTCAATATTCCTTAAAGGATCTTGAAGGAATTCTGGTTAAAAAAGGTGACATATCTGAGAATATTGACAATGCTGAGGATGACTTGGATTCGTCAAAGACATCTGAAACTCAAGATTTTGAAGTTGAAGAAAGCAAATGTCCTGATATCCATCCAGAGTGGTGGGGCTTAAAGTTTGGGTTTGTCTCTGGGGGATTACTCGGTGCAGCATCAAAGAAGAGAAAGTCCTCTACATCTGAAAGTGCTAAAGCCGGGATGGCGAGAACCCCTTTTTTTGAACAAGATCAAGAAAACCTCTACAACTTAGTCCAAGATAAAGCCACAACAGGAAAGCAAGGATTAGGCATCAAAGACAGGCCCAAAAAAGTAGCTGGATGCTATTTCGAGGGTAAAAAGACGTCATTTGGTAATAGTGATGATGAAGATTCTGGGGACGAAGATTCTCTGGAAAACGAAACAGATGATGATGAGGAAGAAAAGAAAAAGATTGTTGAACCCAAATTGAAGCTGAAGAAGTTGTGTAAACAAATTTTAAAACAGGTTCCTGGAAAATCATTGAAGCTGAAACAGCTGAAAGTTCTTGTTGAACAACATTCATCTTCAGTTTTGTCTGATTATTCTAAAAAAGAGGCTATTGCTTACTTGAAGCAAAAGCTGGCAGGCAGTAAGAACTTTTGTATTGAAGGGAAAACATTGAGATTGGCATCCAAGAGAAGTTGA 1110 0.4189 MAAPETPLCYVGVSRRSAAFNLMKQMGWEEGEGLGKDKQGIKGHVRVTNKQDTTGIGLEKPNPWAFDTTQFDNILKRLKVQAPVANDADSNTAEVETELDQAVAVDPPVSVSRSTRPQGRYQKRERGKRVSQYSLKDLEGILVKKGDISENIDNAEDDLDSSKTSETQDFEVEESKCPDIHPEWWGLKFGFVSGGLLGAASKKRKSSTSESAKAGMARTPFFEQDQENLYNLVQDKATTGKQGLGIKDRPKKVAGCYFEGKKTSFGNSDDEDSGDEDSLENETDDDEEEKKKIVEPKLKLKKLCKQILKQVPGKSLKLKQLKVLVEQHSSSVLSDYSKKEAIAYLKQKLAGSKNFCIEGKTLRLASKRS 369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g05976 369 Pfam G-patch domain 17 58 IPR000467 GO:0003676
Vivi5g05976 369 PANTHER G PATCH DOMAIN CONTAINING PROTEIN 14 361 - -
Vivi5g05976 369 MobiDBLite consensus disorder prediction 270 284 - -
Vivi5g05976 369 ProSiteProfiles G-patch domain profile. 15 61 IPR000467 GO:0003676
Vivi5g05976 369 SMART G-patch_5 13 59 IPR000467 GO:0003676
Vivi5g05976 369 MobiDBLite consensus disorder prediction 152 175 - -
Vivi5g05976 369 MobiDBLite consensus disorder prediction 264 292 - -
Vivi5g05976 369 MobiDBLite consensus disorder prediction 107 129 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g05976 K11135 - gmx:100784654 466.848
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi5g05976 5 164231192 164236522 Vivi5g05976 5 164231192 164236522 ECH