Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g05968 ATGAAGAAAGTGGTGGTGAAGTTGGATTTGCATGATGATAAAGCAAAACAGAAAGCCATGAAATCAGTTTCTAGCCTTTCAGGCATTGATTCAATCGCCATGGATATGAAAGAGAAGAAGTTAACAGTAGTTGGTGACATAGACCCTGTGGATGTTGTGAGCAAATTGAGAAAATGGCACACTGAAATTCTAACAGTCGGGCCGGCGAAAGAGCCGGAGAAGAAAAAAGATGATGGAAAAAAAGATGATAATAAGAAGAAAGAAGATGATAAGAAGAAAGATCCAAATGAACAAATTGCTGAGCTTGTTAGGCAATATAGAGCATATAATCCTTACATGACTACATGTTATCATGTTCAGAGTATTGAAGAGAATCCAAATGCTTGTGTTATTTGTTGA 399 0.3684 MKKVVVKLDLHDDKAKQKAMKSVSSLSGIDSIAMDMKEKKLTVVGDIDPVDVVSKLRKWHTEILTVGPAKEPEKKKDDGKKDDNKKKEDDKKKDPNEQIAELVRQYRAYNPYMTTCYHVQSIEENPNACVIC 132
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g05968 132 MobiDBLite consensus disorder prediction 67 99 - -
Vivi5g05968 132 Gene3D - 1 71 - -
Vivi5g05968 132 SUPERFAMILY HMA, heavy metal-associated domain 1 63 IPR036163 GO:0046872
Vivi5g05968 132 MobiDBLite consensus disorder prediction 65 99 - -
Vivi5g05968 132 PANTHER COPPER TRANSPORT PROTEIN FAMILY-RELATED 2 129 - -
Vivi5g05968 132 ProSiteProfiles Heavy-metal-associated domain profile. 1 67 IPR006121 GO:0046872
Vivi5g05968 132 Pfam Heavy-metal-associated domain 6 58 IPR006121 GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g05968 Vivi-Chr5 164030695 164032293 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g05968 - - gmx:100527826 195.282
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi5g05968 5 164030695 164032293 Vivi5g05968 5 164030695 164032293 ECH