Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g05953 ATGAAAAACTCTGAAAAACTCATTTGGGAACAAATGAAGAGTCCTAAATCTGGCACCCCCATCTCCAATGGAGGTGTATTAGTAACTTCATCTGCACATTCTAGAACCTCCCATAAACTTCTAGTCTTACTCATCCTCTTCGTTTCCATTACCTATGTTCTCTACTCGCTTAAGCTCGTCTCAACTTCACGCGCTTGCCGGGAAACACCGTTCTCCACCGACACTAAACTCTCCTCAAATTCATCTCTATCTGCTTTCACCAATGCCACCGCAACAACCACCACCAACCTCCTCACCGATGACGGCGACGACAAGACACAGCTCCGCCACGTGGTTTTCGGAATCGCGGCATCGGCGAAGCTGTGGGAGCAGCGAAAGAACTACATTAAGCTTTGGTACAGATCAAACGACATGCGTGGTGTCGTGTGGCTGGATAACAAAGTGAAAACGGAGAAGAATTCGAGTCTCCTCCCGCCGGTGAGAATCTCCGGCGACACATCGAAATTCGCGTACAAGAACAAGCAAGGACACCGGTCCGCAATCAGAATCTCGCGAATCGTAACGGAGACGCTACGTCTTGGGATGAAAGATGTACGGTGGTTTGTAATGGGAGACGATGATACCGTTTTCGTGACGGAGAATTTAGTTAGGGTTTTGAGAAAGTACGATCATAATCAGTATTACTATATCGGAAGCTTATCGGAGAGTCATTTGCAGAATATATTCTTCTCGTACAATATGGCTTACGGTGGCGGTGGTTTTGCGATAAGCTATCCTTTGGCGAAAGCGCTGAGCAAGATGCAAGATCGGTGCATTCAGAGGTATCCGGGATTGTACGGTTCCGATGATAGAATGCAAGCTTGTATGGCGGAACTCGGTGTTCCACTCACTAAAGAAACCGGGTTTCACCAGTATGATGTGTATGGGAACCTGCTCGGTCTTCTTGGATCTCATCCCGTGACTCCATTAGTGTCACTGCACCACCTTGACGTGGTTGAACCAATCTTCCCGAAAGTGACTCGTGTAGAAGCACTCCAGCGGTTAACTATACCAATGAAGCTTGACTCAGCAGGGCTCATGCAACAATCCATCTGCTACGACCAATCAAGGAGCTGGACCGTTTCTGTTTCATGGGGTTTTGCTGTTCAGATAATTCGCGGGGTGTTTTCACCCCGAGAGATGGAAATGCCTGCAAGAACATTCTTGAATTGGTACAAAAGAGCAGATTACACTGCATATGCATTCAACACGCGACCTGTTAGTCGCCATCCATGCCAGAAGCCTTTTGTATTTTACTTCTCAAAAGCAAACTACAATGATACAATGCAACAAACACTGACTGAATACGAAAAGCATCATGTTCCTAACCCAGCATGTCGGTGGAAGATGGCCAACCCTTCTTCTATTGAGCGAGTAGAAGTACATAAGAAGCCAGATCCACATCTATGGGATAGATCTCCAAGGAGAAACTGTTGCAGAGTTATGAAGTCGAAGAAGAAAGGAACCATGGTGATAGATGTGGGTGTGTGTAGGGAAAATGAGGTGAGTGAAGCATAG 1557 0.4656 MKNSEKLIWEQMKSPKSGTPISNGGVLVTSSAHSRTSHKLLVLLILFVSITYVLYSLKLVSTSRACRETPFSTDTKLSSNSSLSAFTNATATTTTNLLTDDGDDKTQLRHVVFGIAASAKLWEQRKNYIKLWYRSNDMRGVVWLDNKVKTEKNSSLLPPVRISGDTSKFAYKNKQGHRSAIRISRIVTETLRLGMKDVRWFVMGDDDTVFVTENLVRVLRKYDHNQYYYIGSLSESHLQNIFFSYNMAYGGGGFAISYPLAKALSKMQDRCIQRYPGLYGSDDRMQACMAELGVPLTKETGFHQYDVYGNLLGLLGSHPVTPLVSLHHLDVVEPIFPKVTRVEALQRLTIPMKLDSAGLMQQSICYDQSRSWTVSVSWGFAVQIIRGVFSPREMEMPARTFLNWYKRADYTAYAFNTRPVSRHPCQKPFVFYFSKANYNDTMQQTLTEYEKHHVPNPACRWKMANPSSIERVEVHKKPDPHLWDRSPRRNCCRVMKSKKKGTMVIDVGVCRENEVSEA 518
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g05953 518 PANTHER FRINGE-RELATED 37 514 - -
Vivi5g05953 518 Pfam Protein of unknown function, DUF604 239 492 IPR006740 -
Vivi5g05953 518 Gene3D - 99 352 - -
Vivi5g05953 518 FunFam Fringe-related protein-like 99 353 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g05953 Vivi-Chr5 163832415 163836479 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi5g05953 4 512 Glycosyltransferase AT5G41460 68.069 0.0 731
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g05953 - - gmx:100818244 829.32
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi5g05953 5 163832415 163836479 Vivi5g05953 5 163832415 163836479 ECH