Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g05951 ATGCCGGTTATAGTTGAGGGGAAATGCAAAGGTATCATGCTAGCAGTTGCACTAGTGCAGTTAATAATAATTCAATTGGTGGGCCATCGGCTAGGGACATTAGAAGAATTGATTCATCTTCTTGCCAACCAACCTTCCTGTGTTGAGGTTGGATATCAGTTCTATTCTCGTGCCGAAATGGTGGCGATTGGTTTTCATAGCCAATGGTTAAATGGCATTGACTATATAGGCCAATCTTATTCCAAAGAGGTTTCGGCTGCAATTGGATTCGATGCTGGGGTTTTGTCTTGTTTGGAGTACTTGGAAGCAGCTCCGTGGGCGGAGGATGAAGAAGACAAGGTGGCGTCACTCCTGTCGGAACTTCGTCTTGAAGCTGTTGGAGCTGGGGAGGTTTTGAAGAGGGTTTCCACTGAAGTTGTCCATGGAAATGAAGAGGGGAATGATAATGAAGAAGTCCTGCTTAAACTTATTCGTGTGGTTCTTGAAGGAAAAGATGAAAAGGCCAGGAGAGAGATGAAAGGGTTGGTGTCAAAGATGCTCCATGAAAATGCTTCTCAGAATGATCTTCGGAAGGAGTCATTATACTCAGCGTGTAATGATTGTCTGCAGTTACTTCGTCACCACTTTTTACGGGCCGCGGCTTCTGACCTGCAGGATGTGAATCAAATTGCACGTCAAGCAGATAATTTGCATTGGATTTTGGATATTTTGATTGATAGACAGATTGCCGAGGATTTCCTGAAAACATGGGCGTCTGAATCAGAATTATCAGAAGCTCATTCTAAGGTGCCTGCAGTTCACAGGTTTGAGGTTAGCAGAGTTACCGCTAGGTTGTTTGTTGGGATTGGAAAGGGACAATTGTTGGCTTCTAAAGAGGCTAGGTGTTTACTTTTAAAAACATGGCTTGTGCCCTTTTATGATGATTTTGGTTGGATGAGGAGAGCATCCAAGGGCCTTGACAGGCATCTAATCGAGGACGGTCTTAGTAACACAATTCTCACTCTACCACTTTCATGGCAACAAGAAATTTTGCTTGCTTGGTTTAATCGTTTCCTGAATTCCGGTGAAGATTGCCCAAATATTCAAAGAGGGTTTGAAGTTTGGTGGAAAAGGGCTTTCTGGAAGAGGAACGGAGAGCAAGACAGGACAAGACAATTACGAATTACATCTGCGTCAATTGAGCATAGCTGA 1191 0.4366 MPVIVEGKCKGIMLAVALVQLIIIQLVGHRLGTLEELIHLLANQPSCVEVGYQFYSRAEMVAIGFHSQWLNGIDYIGQSYSKEVSAAIGFDAGVLSCLEYLEAAPWAEDEEDKVASLLSELRLEAVGAGEVLKRVSTEVVHGNEEGNDNEEVLLKLIRVVLEGKDEKARREMKGLVSKMLHENASQNDLRKESLYSACNDCLQLLRHHFLRAAASDLQDVNQIARQADNLHWILDILIDRQIAEDFLKTWASESELSEAHSKVPAVHRFEVSRVTARLFVGIGKGQLLASKEARCLLLKTWLVPFYDDFGWMRRASKGLDRHLIEDGLSNTILTLPLSWQQEILLAWFNRFLNSGEDCPNIQRGFEVWWKRAFWKRNGEQDRTRQLRITSASIEHS 396
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g05951 396 PANTHER OSJNBA0011J08.25 PROTEIN-RELATED 83 381 IPR038920 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g05951 Vivi-Chr5 163778517 163785484 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi5g05951 48 85 EF-hand Containing Proteins AT5G13960 60.526 3.13e-10 59.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g05951 - - vvo:131605926 792.727
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi5g05951 5 163778517 163785484 Vivi5g05951 5 163778517 163785484 ECH
Vivi5g05951 5 163778517 163785484 Vivi3g02453 3 41200296 41203247 PCT