Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g05920 ATGGCACGTTTGGTTCTGCCATCGAAGACTTTCGCTTTTTCCAGGAAGAGTCTACTGGGTTTGATCGCACCTGCTCCTATTCAGTTTAATTGCGGCGGTAATTATTTTCAGAAAATCTCGAAAAGTAGTGTCCGATATAGGCATTTCCTTTCATCAGAGGTCATTCTCCGAAAGAATTGTTGCCAGTTTTATTCTTCTGTACCAGCTGTTAAGAAAGCAAGTAGGAAGTTAATTTGTTCGGTTGCTACCGAGGATTTAGCCAAGCAAGAAGAGCCGAAAATGGCGGCGCCAACAGAAATATTCTTGAAGGATTACAAAAAGCCTGATTACTACTTTGAAACTGTGGATCTGAAGTTTTCATTGGGAGAGGAGAAGACAATAGTTAGTTCTAAGATTGCTGTTTTTCCTCGCACTGAAGGTTCTGCTCCCCCACTGGTTTTGGATGGACAAGACATGTCTTTAGTGTCGGTTAAGATTAATGGCAAGGCCTTGAAGGAGGAAGATTATCGTGTGGATTCACGTCATCTAACAATCCAGTCACCTCCTAGTGGTAAATATGATCTTGAAATCGTTACTGAGATTCTCCCACAGAAAAACACATCACTAGAGGGGCTTTACAAGTCATCTGGGAATTTTTGTACTCAATGTGAGGCAGAAGGCTTCCGTAAAATTACATATTATCAGGATCGGCCGGATATAATGGCAAAGTATACAGTTCGCATTGAGGGAGACAAATCACTGTATCCAGTATTGTTGTCTAATGGAAACCTGGTTGGACAGGGTGACTTGGAGGGTGGTAAACATTATGCTATTTGGGAGGACCCCTTCAAGAAGCCTTGTTATCTGTTTGCTTTGGTTGCTGGGCAACTGGAGAGCAGAGATGACACATTTATTACCCGCTCAGGTAGGAAGGTGTCACTTAGGATCTGGACGCCTGCAGATGACGTGCCTAAGACTGCTCATGCTATGTATTCTCTGAAAGCAGCTATGAAGTGGGACGAAGATGTTTTTGGACTTGAATATGACCTAGACCTCTTCAATATTGTTGCTGTACCAGATTTTAACATGGGGGCCATGGAAAACAAAAGCTTGAATATTTTCAATTCCAAGCTTGTATTGGCATCTCCAGAGACTGCTTCAGATGCAGATTATGCTGCAATATTGGGAGTTATTGGCCACGAGTATTTCCACAATTGGACTGGCAACAGAGTGACATGTCGCGACTGGTTCCAACTTAGTCTGAAGGAAGGTCTCACTGTTTTTCGTGATCAGGAATTCTCATCTGACATGGGAAGTCGTACTGTAAAGCGGATTGGTGATGTTTCAAAACTCCGGAATTACCAGTTTCCACAGGATGCAGGTCCCATGGCCCATCCGGTGCGGCCACACTCTTACATCAAGATGGACAATTTCTACACAGTCACGGTCTATGAAAAGGGGGCTGAAGTTGTTCGAATGTACAAAACCTTATTGGGAAGTCAAGGGTTCCGAAAGGGCATGGATCTATATTTTAAGAGACATGATGGGCAAGCTGTAACATGTGAAGATTTTTATGCTGCCATGCGGGATGCAAATGATGCAGATTTTGCCAATTTCTTATCGTGGTACTCTCAGGCTGGGACTCCTATTGTTAAAGTCAATACTTCTTATAATGCAGAAGGACATACATTTTCCTTGAAGATTAGTCAAGAGATACCACCAACTCCAGGGCAGTCAGTTAAGGAACCCACATTGATTCCTATTGCAGTAGGTTTGCTTGATTCAACTGGCAAGGACATTCCTCTTACCTCTATTTATCATAACGGAGCTTTGCAATCCGTTTCAAGCAATGACCAATCAGTCTCCACTACAGTACTTAGAGTCACTAAGAAAGAAGAAGAGTTTGTATTCACTGATATCTTTGAGAGGCCTGTTCCATCTTTGTTAAGGGGATACAGTGCACCTATCCGTCTTCAATCTGATCTTACTGATGACGACCTGTTTTTCCTATTAGCCAACGATTCTGATGAATTCAACCGATGGGAGGCTGGACAAATTTTGGCACGAAAGTTGATGCTCAGCTTGGTGGATGATTTCCAAAATAATAAACCATTGGTTTTAAATTCCAATTTTGTTGGTGGGTTCAAGCGTATACTAACCGACTCAAGTCTGGACAAAGAATTTGTGGCCAAGGCAATAACTCTGCCTGGTGAGGGAGAAATAATGGACTTGATGGAAGTTGCAGACCCTGATGCTGTTCATACTGTTCGGTCTTTCATCAGGAAGCAGCTTGCTAGTGAACTGAAATCAGAGTTCCTTAGCACTGTAGAAAATAATAAGAACTCCAGAGAATATGTGTTTGATCATTCAAACATGTCTAGACGAGCTTTGAAGAATGTTGCTCTTGCTTATCTTGCATCCCTTGAGGAACAAGAATTCACCAACCTTGCTCTTCAAGAATACAAAACTGCTACAAATATGACTGAGCAGTTTGCAGCATTGGCTTCCATAGCCCAGAACCCTGGTAAAAATCGCGATGATGTTCTTGCTGACTTTTATGAGAAGTGGCAGAATGATTACTTGGTTGTGAACAAATGGTTTGCTCTTCAAGCTGTGTCTGACATTCCTGGTAATGTTGAGAATGTGCGGAAACTGTTAAGCCACCCAGCATTTGACTTGCGCAATCCCAACAAAGTATACTCTCTCATTGGAGGTTTCTGCGGGTCCCCTGTGAATTTTCATGCAAAGGATGGGTCTGGCTATGAGTTTTTGGGAGATATTGTGCTGCAACTTGACAAAATAAATCCTCAGGTGGCCTCAAGAATGGTGTCTGCCTTCTCAAGATGGAAGCGTTATGATGAGACCAGACAAAAACTTGCAAAGGCCCAGTTGGAGAAGATCATGTCTACTAATGGCCTATCAGAGAATGTGTTTGAAATTGCTTCGAAAAGCTTAGCTGCTTAA 2943 0.4251 MARLVLPSKTFAFSRKSLLGLIAPAPIQFNCGGNYFQKISKSSVRYRHFLSSEVILRKNCCQFYSSVPAVKKASRKLICSVATEDLAKQEEPKMAAPTEIFLKDYKKPDYYFETVDLKFSLGEEKTIVSSKIAVFPRTEGSAPPLVLDGQDMSLVSVKINGKALKEEDYRVDSRHLTIQSPPSGKYDLEIVTEILPQKNTSLEGLYKSSGNFCTQCEAEGFRKITYYQDRPDIMAKYTVRIEGDKSLYPVLLSNGNLVGQGDLEGGKHYAIWEDPFKKPCYLFALVAGQLESRDDTFITRSGRKVSLRIWTPADDVPKTAHAMYSLKAAMKWDEDVFGLEYDLDLFNIVAVPDFNMGAMENKSLNIFNSKLVLASPETASDADYAAILGVIGHEYFHNWTGNRVTCRDWFQLSLKEGLTVFRDQEFSSDMGSRTVKRIGDVSKLRNYQFPQDAGPMAHPVRPHSYIKMDNFYTVTVYEKGAEVVRMYKTLLGSQGFRKGMDLYFKRHDGQAVTCEDFYAAMRDANDADFANFLSWYSQAGTPIVKVNTSYNAEGHTFSLKISQEIPPTPGQSVKEPTLIPIAVGLLDSTGKDIPLTSIYHNGALQSVSSNDQSVSTTVLRVTKKEEEFVFTDIFERPVPSLLRGYSAPIRLQSDLTDDDLFFLLANDSDEFNRWEAGQILARKLMLSLVDDFQNNKPLVLNSNFVGGFKRILTDSSLDKEFVAKAITLPGEGEIMDLMEVADPDAVHTVRSFIRKQLASELKSEFLSTVENNKNSREYVFDHSNMSRRALKNVALAYLASLEEQEFTNLALQEYKTATNMTEQFAALASIAQNPGKNRDDVLADFYEKWQNDYLVVNKWFALQAVSDIPGNVENVRKLLSHPAFDLRNPNKVYSLIGGFCGSPVNFHAKDGSGYEFLGDIVLQLDKINPQVASRMVSAFSRWKRYDETRQKLAKAQLEKIMSTNGLSENVFEIASKSLAA 980
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g05920 980 Gene3D - 540 653 IPR038438 -
Vivi5g05920 980 SUPERFAMILY Leukotriene A4 hydrolase N-terminal domain 100 288 IPR042097 -
Vivi5g05920 980 Gene3D Neutral Protease Domain 2 376 539 IPR027268 -
Vivi5g05920 980 Gene3D - 655 979 IPR037144 -
Vivi5g05920 980 FunFam Putative aminopeptidase N 292 375 - -
Vivi5g05920 980 Pfam Peptidase M1 N-terminal domain 108 282 IPR045357 -
Vivi5g05920 980 PANTHER PUROMYCIN-SENSITIVE AMINOPEPTIDASE 93 980 IPR012779 GO:0008270
Vivi5g05920 980 CDD M1_APN 104 537 - -
Vivi5g05920 980 FunFam Puromycin-sensitive aminopeptidase 655 979 - -
Vivi5g05920 980 Pfam Domain of unknown function (DUF3458_C) ARM repeats 657 979 IPR024601 -
Vivi5g05920 980 Pfam Peptidase family M1 domain 324 534 IPR014782 GO:0008237|GO:0008270
Vivi5g05920 980 FunFam Aminopeptidase N 376 539 - -
Vivi5g05920 980 Pfam Domain of unknown function (DUF3458) Ig-like fold 540 653 IPR035414 -
Vivi5g05920 980 NCBIfam aminopeptidase N 104 978 IPR012779 GO:0008270
Vivi5g05920 980 FunFam Aminopeptidase N 540 654 - -
Vivi5g05920 980 SUPERFAMILY Metalloproteases ("zincins"), catalytic domain 300 546 - -
Vivi5g05920 980 FunFam Aminopeptidase N 107 290 - -
Vivi5g05920 980 PRINTS Membrane alanyl dipeptidase (M1) family signature 354 364 IPR001930 GO:0006508
Vivi5g05920 980 PRINTS Membrane alanyl dipeptidase (M1) family signature 272 287 IPR001930 GO:0006508
Vivi5g05920 980 PRINTS Membrane alanyl dipeptidase (M1) family signature 222 237 IPR001930 GO:0006508
Vivi5g05920 980 PRINTS Membrane alanyl dipeptidase (M1) family signature 390 405 IPR001930 GO:0006508
Vivi5g05920 980 PRINTS Membrane alanyl dipeptidase (M1) family signature 409 421 IPR001930 GO:0006508
Vivi5g05920 980 Gene3D - 292 375 - -
Vivi5g05920 980 Gene3D tricorn interacting facor f3 domain 107 290 IPR042097 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g05920 Vivi-Chr5 163435486 163444340 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g05920 K01256 - gmx:100775476 1729.53
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi5g05920 5 163435486 163444340 Vivi5g05920 5 163435486 163444340 ECH