Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g05917 ATGCCACCATTCGCAGGCAATCTTCTCGAATCTCAACCAAGATCAGACTCCAACATAGTCACCATCGACGTCGGCGGCCAAATGTTCCAAACCACCAAACAAACCCTAACCTCCGCCGGTCCTAAAACCTTCTTCTCAAGAATCTCCCAAACCTCTCCCCCCTTCACACCTTTCATCGACCGAGACCCCGAAATCTTCTCCCTCTTCCTCTCCCTCCTCCGCACCGGTAACCTCCCTTCCAAAGCCAAATCCTTCGACCTCCAAGACCTCATCATCGAGTCCCGATTCTACGGCATCGAAAACCTCCTCGTTAATTCCTTCTCTAACCCCTCCCAGTTAGAGCCTTTCAATCTTCAGAAATCTCTCCAATTACCGCTAAACGGTAGAGACTCTCCCTCCGCCGTCGCAACCACCTCTCACGGCTCTCTCCACGTCGCTCACGGTAGCAAGATTACATCCTTTGATTGGTCACTACGCCGGAAATCTACCATTCTAACGCACTTCACCGCCGTTGATTCTTTGCTAGCTTTATCTCCTTCCCTCGCCGCTGCCGGTGCTAACGACTTCTCCGGCCTGCAAATTCTCGATTTGGAAAACGGTTACGTTAAGGAGACACTCAATTGGGAGAACGTAACGAAATCAGGATCCACCGTTCAAGCTATTGGATCCTCCCCGGAGAATATGTTCGTCAGCTTTGAATCCTCCCGGAGAAACTCCAATTCTATAGTTGTTTATGATTTGAATAACTTGACACCTGTAACTGAAATCGGTCACAATGAGATCTATGGCGCCGATATTGATTCGGCGATCCCAGCTACAAAATTGCAGTGGATTGAGAGTCACAATTTGTTAATGGCTTCCGGATCACACAGCGGGCCTTCCGGTGTTTCCGGTAATATTAGGTTATGGGATGTTCGTTCCAGGGACGTTGTATGGGAGATTTCTGAGAAAGTTGATTGTTTCTCCGATGTTACAGTTTCTGATTCGTTGTCTGCTATGTTTAAAGTTGGTGTGAACTCCGGTGAAGTGTTTTATATGGATTTGAAGAATTTAGGCTCTGAGAAAAACTCATGGGTTTGTTTAGGTGACAAGAGAAAAGTGATGAATGGTAAGAAAGAAGGGTTTGGTTGCAAAATTGAGACACAAGGGAATCAGGTGTTCTGCAGTAAAGGTGGTGATGTGGAGCTTTGGTCAGAGATTATAATGGGGGGTTCTAGTAACAGGATTTTCAAGAAGAATTTGATGGGGAGAGGGCAAGATATTGGTGGTGCTAAGATTAACAATTTGGCATTTGGAGGAAGTAGAATGTTCTTGACAAGAAAAGATTTGCAATGTGTTGAGGTTTGGCAGAGTTCTTCAAGGGAACTATGA 1371 0.461 MPPFAGNLLESQPRSDSNIVTIDVGGQMFQTTKQTLTSAGPKTFFSRISQTSPPFTPFIDRDPEIFSLFLSLLRTGNLPSKAKSFDLQDLIIESRFYGIENLLVNSFSNPSQLEPFNLQKSLQLPLNGRDSPSAVATTSHGSLHVAHGSKITSFDWSLRRKSTILTHFTAVDSLLALSPSLAAAGANDFSGLQILDLENGYVKETLNWENVTKSGSTVQAIGSSPENMFVSFESSRRNSNSIVVYDLNNLTPVTEIGHNEIYGADIDSAIPATKLQWIESHNLLMASGSHSGPSGVSGNIRLWDVRSRDVVWEISEKVDCFSDVTVSDSLSAMFKVGVNSGEVFYMDLKNLGSEKNSWVCLGDKRKVMNGKKEGFGCKIETQGNQVFCSKGGDVELWSEIIMGGSSNRIFKKNLMGRGQDIGGAKINNLAFGGSRMFLTRKDLQCVEVWQSSSREL 456
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g05917 456 Pfam BTB/POZ domain 20 106 IPR003131 GO:0051260
Vivi5g05917 456 PANTHER BTB/POZ DOMAIN-CONTAINING ADAPTER FOR CUL3-MEDIATED RHOA DEGRADATION PROTEIN FAMILY MEMBER 15 453 IPR045068 -
Vivi5g05917 456 CDD BTB_POZ_KCTD-like 20 97 - -
Vivi5g05917 456 SUPERFAMILY POZ domain 17 105 IPR011333 -
Vivi5g05917 456 Gene3D Potassium Channel Kv1.1; Chain A 9 115 IPR011333 -
Vivi5g05917 456 Gene3D - 130 456 IPR015943 GO:0005515
Vivi5g05917 456 SMART BTB_4 18 114 IPR000210 GO:0005515
Vivi5g05917 456 SUPERFAMILY WD40 repeat-like 142 360 IPR036322 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g05917 Vivi-Chr5 163380503 163382195 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g05917 - - tpra:123915936 816.994
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi5g05917 5 163380503 163382195 Vivi5g05917 5 163380503 163382195 ECH