Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g05896 ATGGCTGCTATATTCACAGTCGCTTCTTCTTCTGCTCCTCCTCTAAGCCACCGCGCAATACCGAATAACTTTCCTCTACGGAAAACTTCAGTTTCGAATAGTTTGTATTTCTTGTCAGTTTGTTCTGACAGGAGAGTTGTTAGATCCGGTAGTGGCGGTAGATTGAGTGTTGCTGCTAGTCCTGCGACTGAAAGTGTTGTGGTTGATACTGCACCGCTTACCAAACAGGATCTTGTTGATTACCTTGCATCTGGTTGTAAGCCCAAGGATAAATGGAGAATAGGTACTGAACATGAAAAGTTCGGTTTTGAGCTTGGAAGCTTGCGGCCTTTGAAATATGAACAAATAGCAGAATTGCTGAATGGCATTGCCGAGAGGTTTAACTGGGAAAAATTAATTGAAGGTGATAACATTATTGGACTCAAACAGGGAAACCAAAGCATATCATTGGAGCCAGGTGGTCAGTTTGAACTTAGTGGAGCTCCTCTTGAAACCCTGCATCAAACTTGTGCTGAAATTAATTCGCACCTCAATCAAGTTAAAGCTGTTACTAAGGAAATGGGAATCGGATTTTTGGGGATTGGTTTCCAGCCAAAGTCGGAGCGCAAAGACATACCTTTGATGCCAAAGGAAAGATATGAGATTATGAATAACTACATGCCCAAAGTTGGTTCTCTTGGGCATGAGCAGATGTACAGGACATGCACTGTACAGGTCAATCTGGACTTTAGTTCTGAAGCTGACATGATCCGGAAATTTCGTGTTGGCCTAGCTTTGCAGCCTTTAGCGACAGCTCTTTTTGCAAATTCACCTTTCATAGAGGGAAAGCCCAATGGGTTTGTCAGTATGAGAAGTCATATTTGGACGGATACTGACAACGACCGCACAGGCATGCTGCCTTTTGTTTTCAATGACTCTTTCGGGTTTGAGCAGTACGTTGATTATGCTCTTGATGTTCCAATGTATTTTGCATATCGGAAAAAGAGATATATCGACTGTACTAGAAATACCTTCAGGGACTTTATGGCAGGAAAGCTTCTTAGTATTCCTGGTGAATTACCGACTCTTAATGATTGGGAGAATCATTTGACCACTATATTTCCCGAGGTCAGGCTAAAGAGGTATTTGGAGATGAGAGGGGCTGACGGAGGACCTCGGGAAAGGTTGTATGCTTTACCAGCATTTTGGGTAGGTTTATTGTACGATGAGGTTTCTTTGCAGCGTGTTTCTGATTTGATAGCAGATTGGACTTTAGAAGAAAGACAAATGCTAAGGAATAAGGTCCCTGTAACTGGTCTGAAGACGCCATTTCGAGATGGTTTGCTGAAGCATGTCGCCGAAGAGGTTCTAGAGTTGGCAAAGGATGGCTTGGAAAGAAGAGGCTTTAAAGAATCCGGATATTTAGATCCGGTAGCTGAGGTGGTTAGAACAGGTGTGACTCCAGCTGAGAGGCTTTTGGAGTTGTATCATGGAAAGTGGGAGCAATCTATAGATCATGTATTTGAGGAATTGCTTTATTAA 1521 0.428 MAAIFTVASSSAPPLSHRAIPNNFPLRKTSVSNSLYFLSVCSDRRVVRSGSGGRLSVAASPATESVVVDTAPLTKQDLVDYLASGCKPKDKWRIGTEHEKFGFELGSLRPLKYEQIAELLNGIAERFNWEKLIEGDNIIGLKQGNQSISLEPGGQFELSGAPLETLHQTCAEINSHLNQVKAVTKEMGIGFLGIGFQPKSERKDIPLMPKERYEIMNNYMPKVGSLGHEQMYRTCTVQVNLDFSSEADMIRKFRVGLALQPLATALFANSPFIEGKPNGFVSMRSHIWTDTDNDRTGMLPFVFNDSFGFEQYVDYALDVPMYFAYRKKRYIDCTRNTFRDFMAGKLLSIPGELPTLNDWENHLTTIFPEVRLKRYLEMRGADGGPRERLYALPAFWVGLLYDEVSLQRVSDLIADWTLEERQMLRNKVPVTGLKTPFRDGLLKHVAEEVLELAKDGLERRGFKESGYLDPVAEVVRTGVTPAERLLELYHGKWEQSIDHVFEELLY 506
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g05896 506 PANTHER GLUTAMATE--CYSTEINE LIGASE, CHLOROPLASTIC 47 506 IPR035434 GO:0004357|GO:0006750
Vivi5g05896 506 Pfam Glutamate-cysteine ligase family 2(GCS2) 121 416 IPR006336 GO:0004357|GO:0042398
Vivi5g05896 506 NCBIfam glutamate--cysteine ligase 72 506 IPR011556 GO:0004357|GO:0006750
Vivi5g05896 506 SUPERFAMILY Glutamine synthetase/guanido kinase 84 504 IPR014746 GO:0003824
Vivi5g05896 506 Gene3D - 58 506 - -
Vivi5g05896 506 PIRSF GCL 57 506 IPR035434 GO:0004357|GO:0006750
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g05896 Vivi-Chr5 163158701 163166866 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g05896 K01919 - gmx:547545 810.831
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi5g05896 5 163158701 163166866 Vivi5g05896 5 163158701 163166866 ECH