Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g05860 ATGGCCAAAATTTACCCAAATCTAGAATCTACAACATCATCTCAGTCTCATGATGATCAGTGGGTCAGTAATAAAAGAGAGAGATATACTTTGTGGATGAAATCACTTGTTCTTCATTCTAATGGTTGCACTGTCTATGATTCAAAGGGTAACATAGTTTATAGAGTTGATAACTATGATACAAAGGGTGGAAGAGAAATTAATCTCATGAATCTACAAGGCAATGTCCTCTGTATCATCAAAAAGAGATTACTAGCTTTTGGATGTTGGGAAGGACACAGATATTACAGCAATTCCAATTCAAGAAGTCATGAGGATCAACCATGGTTTCAAGTTAATAGATGTCTCACAGGTAAAATAGCATGTCAGATTAAAGCTGGGTCCCAAAATTTGTGCATAGAAAGAATGAGTAATGGCAAAGCGTTTGGTTTTCAGATAGTAAACAAAGATGGAGAAATGATAGCAGAGGCAAAACAAAAACTATCATCCTCAGGAGTTGTTTTGAGTAATGATGTTCTAACGTTGGATTTGGAATCTGGAACAGATCATTGCCTTATAATGGCTTTGATTACGGCATACGGATTGATGTGCGGAAAAATGTAG 603 0.3615 MAKIYPNLESTTSSQSHDDQWVSNKRERYTLWMKSLVLHSNGCTVYDSKGNIVYRVDNYDTKGGREINLMNLQGNVLCIIKKRLLAFGCWEGHRYYSNSNSRSHEDQPWFQVNRCLTGKIACQIKAGSQNLCIERMSNGKAFGFQIVNKDGEMIAEAKQKLSSSGVVLSNDVLTLDLESGTDHCLIMALITAYGLMCGKM 200
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g05860 200 Pfam LURP-one-related 17 191 IPR007612 -
Vivi5g05860 200 SUPERFAMILY Tubby C-terminal domain-like 18 197 IPR025659 -
Vivi5g05860 200 Gene3D - 18 200 IPR038595 -
Vivi5g05860 200 PANTHER - 27 197 IPR007612 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g05860 Vivi-Chr5 162714424 162715590 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g05860 - - vvo:131608047 340.887
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi5g05860 5 162714424 162715590 Vivi5g05860 5 162714424 162715590 ECH