Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g05791 ATGGTGGCCTCGTCGCAAAAGGTACTTGTTACCGGTGGTGCCGGTTTCATCGGCACTCACACGGTGGTTCAGCTTCTCAACAACGGCTTTCACGTTTCCATCATCGATAACTTCGATAACTCCGTTATGGAAGCTGTAGACCGTGTTCGTGAAGTTGTTGGTTCGAACCTTTCTCAGAATCTTGAATTCACTCTGGGAGATCTTAGGAATAAAGATGATTTGGAGAAACTATTCTCGAAATCGAAATTCGATGCTGTGATTCACTTTGCTGGACTAAAAGCAGTTGGTGAAAGTGTTGAAAATCCTCGTCGTTATTTCGATAATAATCTTGTTGGCACTATCAATCTCTATGAGGTTATGGCTAAGCATAATTGTAAAAAGATGGTTTTCTCTTCATCTGCAACTGTTTATGGTCAGCCTGAAAAGATACCCTGTGTGGAGGATTTCAAGTTACAAGCCATGAACCCTTATGGACGGACCAAGCTTTTCCTTGAGGAAATTGCACGAGATATTCAGAAAGCTGAGCCAGAATGGAAAATCGTTTTACTGAGATACTTTAATCCAGTCGGGGCACATGAAAGTGGTAAACTCGGTGAAGATCCCAGAGGCATCCCAAATAACCTTATGCCTTATATACAGCAAGTAGCCGTTGGAAGATTACCTGAGCTCAATGTATATGGTCATGATTATCCTACAAGGGATGGCTCTGCGATACGGGACTATATCCATGTGATGGACTTAGCAGATGGTCACATTGCTGCCCTGAGAAAGCTTTTCACAACAGAAAACATAGGTTGTACTGCTTACAATTTGGGAACCGGTTGTGGTTCATCTGTGCTTGAAATGGTTGATGCATTTGAGAAAGCTTCTGGCAAGAAAATTGCTTTGAAATTGTGTCCAAGAAGGCCAGGAGATGCTACAGAGGTTTATGCATCTACAGAGAAAGCCGAGAAAGAACTTGGTTGGAAGGCGAAATATGGTGTAGAGGAAATGTGCAGGGACCAGTGGAATTGGGCAAAGAACAACCCTTGGGGTTACTCAGGGAAGCCTTGA 1053 0.4321 MVASSQKVLVTGGAGFIGTHTVVQLLNNGFHVSIIDNFDNSVMEAVDRVREVVGSNLSQNLEFTLGDLRNKDDLEKLFSKSKFDAVIHFAGLKAVGESVENPRRYFDNNLVGTINLYEVMAKHNCKKMVFSSSATVYGQPEKIPCVEDFKLQAMNPYGRTKLFLEEIARDIQKAEPEWKIVLLRYFNPVGAHESGKLGEDPRGIPNNLMPYIQQVAVGRLPELNVYGHDYPTRDGSAIRDYIHVMDLADGHIAALRKLFTTENIGCTAYNLGTGCGSSVLEMVDAFEKASGKKIALKLCPRRPGDATEVYASTEKAEKELGWKAKYGVEEMCRDQWNWAKNNPWGYSGKP 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g05791 350 FunFam UDP-glucose 4-epimerase 4 282 350 - -
Vivi5g05791 350 CDD UDP_G4E_1_SDR_e 7 340 IPR005886 GO:0003978|GO:0006012
Vivi5g05791 350 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 5 346 IPR036291 -
Vivi5g05791 350 FunFam UDP-glucose 4-epimerase 8 202 - -
Vivi5g05791 350 NCBIfam UDP-glucose 4-epimerase GalE 7 343 IPR005886 GO:0003978|GO:0006012
Vivi5g05791 350 Pfam GDP-mannose 4,6 dehydratase 9 334 IPR016040 -
Vivi5g05791 350 PANTHER UDP-GLUCOSE 4-EPIMERASE 5 347 - -
Vivi5g05791 350 Gene3D - 197 339 - -
Vivi5g05791 350 Gene3D - 8 279 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g05791 Vivi-Chr5 161793912 161797143 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi5g05791 8 338 Miscellaneous Gene Families AT4G00110 28.035 3.79e-25 103
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g05791 K01784 - gmx:100781806 652.514
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi5g05791 5 161793912 161797143 Vivi5g05791 5 161793912 161797143 ECH