Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g05787 ATGGCCGATTGGGGTCCGGTGATAATCGCGGTGGTGCTGTTCGTGATTCTGTGTCCAGGTCTGCTGTTTCAAATACCAGGAAGAGGAAGAATAATCGAGTTCGGAAGCATGCAAACAAGCGGTGCTTCCATTCTTGTTCACGCCATCATTTACTTTGGACTCATCACTATTTTACTCATTGCCGTCGGCGTTCACATCTACACTGGGTAA 210 0.4762 MADWGPVIIAVVLFVILCPGLLFQIPGRGRIIEFGSMQTSGASILVHAIIYFGLITILLIAVGVHIYTG 69
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g05787 69 PANTHER OS05G0103400 PROTEIN 1 69 IPR021775 -
Vivi5g05787 69 Pfam Protein of unknown function (DUF3339) 1 67 IPR021775 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g05787 Vivi-Chr5 161765595 161766203 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g05787 - - bvg:104908027 128.642
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi5g05787 5 161765595 161766203 Vivi5g05787 5 161765595 161766203 ECH