Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g05775 ATGCACATACGCCGTCTCAGACTCGACGACGACGACGACGAAGAAGACGGCGACACCGTCGAGCCTCAGCCACAACCTCGCACATCCCCGCACCAAACTCAAACTTCCCCCAATTTCCCCCCGGAGCCCGTCGTAATCTCCGACGACGACTTCATCGACGTCCCCGATGACCCCATCCCGCACACTCCTCCTCCACCCGTTCCCGAACCTCAACCTTCGGACTGTCCCGTCAACGATTTTCTCCGCCGACTCGGGTTTTGCTTGAAGAGAGTCTCGCTTGCTGATTGTCTTCGCGAACTAGGGAGTTCGGTGAACGGCTTCCAAGGGTTTGATGTTGCTAGAAAAGCCAAATTATGTTTCGAGCAGTTTCTGTTTTCTGATCTTAATTTCTGTGGGAGCGGCGTGCTTCCTCCTAATGTGGAATCTATGCATCTCGATGTCCTTCCAGGTCCCTACGTTTTGCAGGTTGATGAGATTCTCAATATCACTTGTCCTCTAAAAAGCAGATATCAACAAGCTCCTCCAGGCCTTAAAAGGTGCCTGAAGTTGTCAATGACTGATGGTATTCAGAGAGTTTTTGGAATGGAGTACCGGCCTATTAAAGCTCTTGAAGTTTGTGCATCTTCTGGTTTAAAGGTCGCAATCTCTAACGTACAAGTGCGTCGTGGACTTTTGATGCTGGTTCCTGAGACCATTCAAGTATTGGGGGGATTAGTTGAGGAGCTGGATGCAGCTCGAAAGCGGCTGATTGATGAACTAAATAAGCCAGCTAGGGGAAAAAGAACCAGAGATGGGGTGCTTCCCCCTTTATCAGTCCGGGCGACTCTTGCTGCATGGCCTTCAAATAGAGTTGATGATCCCAGTAACAGTGGCTCAACATTACGCAGTACTGATACTGTCCAGGCAGACAACCAAGGTACTGGCAACAGCATTCCTGGCACTCATAACAACTCCTCGCGCATGGGTGCACAAAATTCTACTTCCAATTCAATACCCCACATGGTTTCAAACGTGGCGCGAACAGATGTTGACATGCAGCGGCAGCAGGGTGCCAGCATTACAACTGGATATACTACACGCACTGGAGCACAAAATGCTACATCCAATTCAATACCCCACATGGTTTCAAACGTGGAGCGAATGAATATTGATACGCCAGGCCAGCGGGGTGCAAGAATAGCAACTGGACATGCTTCACCTATGCATGCACAAAATGCTACTTCTAATTCAGTACCTCATGTGGTTTCAAATGTGCAGCCAAACGTGGATCAAATGAATATTGATACGCCGGGCCAGCGGGGTGCCAGAGTAGCAACTGAACATGCTTCACCTATGGATGCACTACATGCTACTTCAAATTCAATACCTCACATGGTTTCAAATGTGCAGCCAATGAATATTGATATGCAGCGGGCTACCAATCCTGTGTCCCATCATAATTCAATGGCTAACCGGACTTCTTCAATAGCCGAGGAGATGCATATAGATACTGCTAATATTTTCAGGGAAAACTCTATTGGCAACCAATCTTCTCACATGAACTCGAATGTTGCAGAGGTACATGAAGACACTGTTCACATAGCAAGTTCCGTGACTACTGAGCGCTCTCCTGTTTCTGAAATTGTGGATACAGACCGGGACAGGGTTCCTGTAGTCACAGATAATACTCCTCTGAATGGATCTTCGTCCACTGGTTTTAACTATGAAGATATCTTGATGGATGATGTCGGTGACAATCCACTCATACTTTCTGGAGACCCTGAAGTTCCCTTCACATACCTAGCTAGTTTGTCAGCCAAGTGGGCTGCAATGAAGGAGACGGATTCTCTGGTTCAGGGTAAAATTAAGTGCTTTCTAACTGGTGTTAAAGGATTCCAATATAAGAAAAGGACAACCTATGAGCTTCAGGCATATGTAGATGACGGTAGTCTTATTTCTGAAATCCTCATTGATCATGATGTTGTACAGAAAGGAATTGGTTATTCCCCTGTGGAGGTCACTGCAGCTCTTTCTTCTTCTGACACAAATATAGTCCAGAAGATGAAGGAGACTATGCGCAAATTTCAAGCTTTCTTAGCAAACTTTGAGGGAGTAATGCTTGTGGAATTAAATAGAAAACATTCCCTTCCACTGGTTCTAGAAATGAGTCAAGGCTGTCCTAGATCTGATGCGTGGTCCCTTCTAAGAAGGCTCAAGTCTCTTCCCCCTTCACAAGCTCTAAAACATTTTCCTTCAGACGCAATCGTTTTATCCCCATAA 2259 0.4644 MHIRRLRLDDDDDEEDGDTVEPQPQPRTSPHQTQTSPNFPPEPVVISDDDFIDVPDDPIPHTPPPPVPEPQPSDCPVNDFLRRLGFCLKRVSLADCLRELGSSVNGFQGFDVARKAKLCFEQFLFSDLNFCGSGVLPPNVESMHLDVLPGPYVLQVDEILNITCPLKSRYQQAPPGLKRCLKLSMTDGIQRVFGMEYRPIKALEVCASSGLKVAISNVQVRRGLLMLVPETIQVLGGLVEELDAARKRLIDELNKPARGKRTRDGVLPPLSVRATLAAWPSNRVDDPSNSGSTLRSTDTVQADNQGTGNSIPGTHNNSSRMGAQNSTSNSIPHMVSNVARTDVDMQRQQGASITTGYTTRTGAQNATSNSIPHMVSNVERMNIDTPGQRGARIATGHASPMHAQNATSNSVPHVVSNVQPNVDQMNIDTPGQRGARVATEHASPMDALHATSNSIPHMVSNVQPMNIDMQRATNPVSHHNSMANRTSSIAEEMHIDTANIFRENSIGNQSSHMNSNVAEVHEDTVHIASSVTTERSPVSEIVDTDRDRVPVVTDNTPLNGSSSTGFNYEDILMDDVGDNPLILSGDPEVPFTYLASLSAKWAAMKETDSLVQGKIKCFLTGVKGFQYKKRTTYELQAYVDDGSLISEILIDHDVVQKGIGYSPVEVTAALSSSDTNIVQKMKETMRKFQAFLANFEGVMLVELNRKHSLPLVLEMSQGCPRSDAWSLLRRLKSLPPSQALKHFPSDAIVLSP 752
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g05775 752 MobiDBLite consensus disorder prediction 278 331 - -
Vivi5g05775 752 MobiDBLite consensus disorder prediction 57 73 - -
Vivi5g05775 752 Pfam RecQ mediated genome instability protein 93 247 IPR013894 -
Vivi5g05775 752 SMART DUF1767_2 78 171 IPR033472 -
Vivi5g05775 752 Pfam Recq-mediated genome instability protein 1, C-terminal OB-fold 590 731 IPR032199 GO:0000166
Vivi5g05775 752 MobiDBLite consensus disorder prediction 22 41 - -
Vivi5g05775 752 MobiDBLite consensus disorder prediction 1 73 - -
Vivi5g05775 752 MobiDBLite consensus disorder prediction 282 331 - -
Vivi5g05775 752 FunFam RecQ-mediated instability protein (DUF1767) 127 253 - -
Vivi5g05775 752 Gene3D - 127 253 IPR042470 -
Vivi5g05775 752 PANTHER RECQ-MEDIATED GENOME INSTABILITY PROTEIN 1 RMI1 73 733 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g05775 K10990 - gmx:100803734 703.36
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi5g05775 5 161525765 161532611 Vivi5g05775 5 161525765 161532611 ECH