Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g05759 ATGGATCTTCCCGTCAAAGAAGAAGCATTTGAAATTCCAATTCAAACCGAACCGGACCGGAAGCCAAGAAGAAAACCCGGTCCACATGTTCCTCCTCCTCCCGGCTCGGTCATTGACCTTAGTAGCAGTAGCAGCGATTCCGACTCCGATTCCGATTCCGTCGGGGATTTGGAAACGGTTGTTGCGAGTGTGGTCCAATCGGCGGAGAGTCCGTCCAAGAAAAGAAAGGTGAATGATAAGGTCGCGATTTTGCCGGCCGGGTTTCTTACTCCGTTGCGGCCTGCGCCGTCGCAGAATGCTGTTCTGTCTTTGCCGGCGCCGGAGTGGGCTTCTTCGTCAAACCGGTTGAATCAGAATGTTAGTTATGCGCTTAAAGGATGTAAGCAGTTTTGGAAAGCCGGTGATTATGATGGTTCGCCTGGTCGTGCGTTTGAATCTTCTTCAGTTGGTATGGATCATGTCAGGGTTCACCCCAAGTTTCTACATTCTAATGCCACAAGTCATAAGTGGGCTCTCGGAGCTTTTGCCGAGCTTTTGGACAATGCATTGGATGAGGTTTGTAATGGTGCCACATATGTAAATGTAGATATGATTGAGAGTAAGAAAGATGGCTCCAAGATGTTGCTAATAGAAGATAACGGCGGTGGGATGGATCCTGATAAAATACGACAATGCATGTCGCTGGGATATTCCATGAAAAGCAAGATGGCAAATACAATTGGACAATATGGAAATGGCTTTAAAACAAGTACCATGAGGCTTGGGGCTGATGTAATTGTGTTCTCCCGTTGTATAGGAAAAGATGGGAAGAGGTCTACACAGAGCATAGGCTTGCTGTCTTATACATTTTTGAGGAATACAGGGAAGGAAGACATTGTAGTGCCCATGCTGGACTACGAAAGAGATGGACAGGGATGGAAAAGGATGTTACGAACTTCTCTGGATGATTGGAAGAATAATGTTGAGACAGTAGTTCAGTGGTCACCATTTTCTGATGAGGCCGACCTTCTCCGTCAGTTCAACCTGTTGAAAGATCAAGGTACACGGGTAATTATATATAATCTCTGGGAGGATGACCAAGGTCAGCTGGAACTCGATTTTGAAGACGATCCACATGATATTCAAATAAAAGGTGTAAATCGAGATGAGAAAAACATCAAGATGGCCAAAGATTTTCCGAACTCTACACACTTTTTAACTTATCGACATTCACTGAGGAGTTATGCTTCAATTTTATATCTGAGGTTTCCTCAAGGCTTCCGAATTATTCTTCGTGGGAAAGATGTTTTGCATCACAATATAGTCAATGATATGATGTTTTCTCAAGAGGTCACGTACAGGCCTCAATCAGGAGTTGCTGATGGGGTTCTTAAGGATTCAAATATGGTTGCTATTGTTACGATTGGGTTTGTCAAGGATGCAAAACATCATATTGATGTTTCTGGGTTTAACGTCTATCACAAGAATCGGCTCATCAAGCCATTCTGGAGAATCTGGAATCCAGCAGGCAGTGGTGGCCGTGGGGTCATAGGTGTATTGGAAGCCAACTTTGTTGAACCTGCTCATGACAAGCAAGGCTTTGAACGTACATTAGTTTTGTCAAGACTGGAGCAACGGCTGATACAAATGCAGAAAACTTATTGGGGAAGTAACAGCCATAAAATTGGCTATGCTTCAAATCGAGCTAGAAAAGAAAACAGTGGTTTTGCTGGTAAAGATCCATCTCCTGATCCAGTTCCTGAATCATCTCAATTGAAAAGGAAATATTCGGCCCCAAATGGCAAGGCATCATCACCATTGGCATCAGACGAACTGTATTCACACTCGAAACAGAAACACATGCGAACAGAATCCCAGAGACATAGTGAACACCGAAATGGTCACTCGGCAGTTTCCCCTATAAGTATGAGTCAAAGTTCATCAGAAGAATCATCATATGCGAATGATACCAGTGATCAAAATGGTAATGTCTCGTCAAAGAACCAAGCAAAGACTGATAGCCGAAAGTTTTTTAGTGTTGGAAAATCTTCTGGAAAGGAGAATGGAAATTTTCAGGATTCTACACCAAGGGGAAATGCCTCGCAGTCTATGCAAGGGTCTAACCCACAGGGAAAAGGTGTTAATGTTCCTGAGCAACCAATATCTGATTTATCATCTCTAGAAGTGGAACTGTTGAGAAAAGAGAATCGCGAGTTGAAGGAGAGATTAAAGAAGAAAGACGAAGAATCATTAGGGGAAGTGTCACAAGCTTTACAGGCGGAGAAGCATAAGTGCATATCTCTCGAGGCTCAGCTCCGTGATGCCGAACAAAAGATTGAAGATATGAACAAGGAACAAGAAACTCTAATTGATGTGTTCGCTGAAGAGAGGGATAGGCGGAATGCTGAAGAAAAAAATTTGAGAAAGAAGCTCCAGGAAGCATCAAATACCATTCAAGAGCTGCTGGAGAAGGTTCGACTACTTGAAAGGAAGTCTTCAAGTGGCAAAGTAGTATAA 2496 0.4335 MDLPVKEEAFEIPIQTEPDRKPRRKPGPHVPPPPGSVIDLSSSSSDSDSDSDSVGDLETVVASVVQSAESPSKKRKVNDKVAILPAGFLTPLRPAPSQNAVLSLPAPEWASSSNRLNQNVSYALKGCKQFWKAGDYDGSPGRAFESSSVGMDHVRVHPKFLHSNATSHKWALGAFAELLDNALDEVCNGATYVNVDMIESKKDGSKMLLIEDNGGGMDPDKIRQCMSLGYSMKSKMANTIGQYGNGFKTSTMRLGADVIVFSRCIGKDGKRSTQSIGLLSYTFLRNTGKEDIVVPMLDYERDGQGWKRMLRTSLDDWKNNVETVVQWSPFSDEADLLRQFNLLKDQGTRVIIYNLWEDDQGQLELDFEDDPHDIQIKGVNRDEKNIKMAKDFPNSTHFLTYRHSLRSYASILYLRFPQGFRIILRGKDVLHHNIVNDMMFSQEVTYRPQSGVADGVLKDSNMVAIVTIGFVKDAKHHIDVSGFNVYHKNRLIKPFWRIWNPAGSGGRGVIGVLEANFVEPAHDKQGFERTLVLSRLEQRLIQMQKTYWGSNSHKIGYASNRARKENSGFAGKDPSPDPVPESSQLKRKYSAPNGKASSPLASDELYSHSKQKHMRTESQRHSEHRNGHSAVSPISMSQSSSEESSYANDTSDQNGNVSSKNQAKTDSRKFFSVGKSSGKENGNFQDSTPRGNASQSMQGSNPQGKGVNVPEQPISDLSSLEVELLRKENRELKERLKKKDEESLGEVSQALQAEKHKCISLEAQLRDAEQKIEDMNKEQETLIDVFAEERDRRNAEEKNLRKKLQEASNTIQELLEKVRLLERKSSSGKVV 831
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g05759 831 Coils Coil 751 824 - -
Vivi5g05759 831 SUPERFAMILY ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 173 373 IPR036890 -
Vivi5g05759 831 MobiDBLite consensus disorder prediction 37 56 - -
Vivi5g05759 831 Gene3D - 158 357 IPR036890 -
Vivi5g05759 831 PANTHER ZINC FINGER CW-TYPE COILED-COIL DOMAIN PROTEIN 3. 82 805 IPR045261 GO:0016887
Vivi5g05759 831 MobiDBLite consensus disorder prediction 1 56 - -
Vivi5g05759 831 MobiDBLite consensus disorder prediction 1 26 - -
Vivi5g05759 831 Pfam Morc6 ribosomal protein S5 domain 2-like 403 548 IPR041006 -
Vivi5g05759 831 Pfam Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 173 276 - -
Vivi5g05759 831 MobiDBLite consensus disorder prediction 606 627 - -
Vivi5g05759 831 MobiDBLite consensus disorder prediction 586 605 - -
Vivi5g05759 831 FunFam MORC family CW-type zinc finger protein 4 157 361 - -
Vivi5g05759 831 MobiDBLite consensus disorder prediction 565 716 - -
Vivi5g05759 831 MobiDBLite consensus disorder prediction 628 715 - -
Vivi5g05759 831 Coils Coil 722 742 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g05759 Vivi-Chr5 161371470 161380432 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g05759 - - gmx:100816702 1080.47
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi5g05759 5 161371470 161380432 Vivi5g05759 5 161371470 161380432 ECH