Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g05758 ATGCCGGAAGAGGAGTTGGTTGATATCAAGTTTAGGTTGTATGATGGGTCTGATATTGGACCGTTTCGGTATTCTTCTGCTGCTACTGTTGATATGCTCAAGCAAAGGATTGTCTCTGATTGGCCTAAAGGCAAATCACTCCTGCCAAAGTCAGCAAGTGAAGTGAAATTGATTAGCTCTGGTAAAATCTTGGAAAACAACAAGACTGTTGGTCAGTGTAAAGCACCCTTTGGCGATATTGCGGGGGGAGTTATAATCATGCATGTTGTTGTACAGCCATCTCTAGCAAAATCTAAAGCTGAAAAGAAGATTGATGATTCGTCCAAGAAGGTTGCGTGTTCTTGTTCTATATTGTGA 357 0.4146 MPEEELVDIKFRLYDGSDIGPFRYSSAATVDMLKQRIVSDWPKGKSLLPKSASEVKLISSGKILENNKTVGQCKAPFGDIAGGVIIMHVVVQPSLAKSKAEKKIDDSSKKVACSCSIL 118
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g05758 118 CDD Ubl_MUBs_plant 6 93 - -
Vivi5g05758 118 PIRSF MUB 1 118 IPR017000 -
Vivi5g05758 118 Pfam Ubiquitin-2 like Rad60 SUMO-like 6 116 IPR039540 -
Vivi5g05758 118 PANTHER UBIQUITIN-LIKE PROTEIN 3 HCG-1 PROTEIN 1 117 IPR040015 -
Vivi5g05758 118 ProSiteProfiles Ubiquitin domain profile. 7 73 IPR000626 GO:0005515
Vivi5g05758 118 SUPERFAMILY Ubiquitin-like 2 97 IPR029071 -
Vivi5g05758 118 Gene3D - 1 100 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g05758 Vivi-Chr5 161360691 161365448 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g05758 - - gmx:100810070 216.083
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi5g05758 5 161360691 161365448 Vivi5g05758 5 161360691 161365448 ECH