Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g05757 ATGGCCATGCATCGTGAAACTTGGGCTTTTGTCTTTGGCCTTCTAGGCAACATCATTTCCTTTGCAGTGTTTCTTTCACCAGTGCCAACTTTTTACATAATCTTCAAGAAGAAATCTGCTGAGGGATTTCAGTCACTTCCTTATGTTGTTGCACTTTTCAGTGCAATGCTTTGGATTTACTATGCATTTGTGAAAAGAGAAGCTGCTCTTCTTCTCATCACCATTAACACTTTTGGAATTATTGTTGAATCAGCTTATCTCATAATCTTCCTGATTTATGCCTCAAAGAAATCTAGGCTTTCTACCATAAAACTACTTCTCTTGTTGAATGTGTTTGGCTTCGGAGCCATGCTTCTATCAACTCTCTACCTCGCAAAGGGAGCGAAACGTCTCGCTATCATTGGATGGATTTGTCTTGTTTTCAACATAAGTGTCTTTGCTGCACCTCTCTTCGTCATCAGCAAAGTCATAAGGACGAGGAGCGTTGAATACATGCCATTTTTCTTATCCTTCTTTTTAACCATCAATGCTGTTATGTGGTTCTTCTATGGCCTTCTCCTCAAGGATTACTATGTTGCTCTACCAAATACACTTGGATTTGTGTTTGGAATAATTCAGATGGTGATATATTTGATATATAGAAATGCAACACCAGTGCTTCAGGCACCATTGAAGGGTCAAGAACTGAGTGGTGGCCATATCATTGATGTTGTGAAGACTGGATCTGAGCACAATCCTGGAGGTGGAGGAGGTGCTGTTGGCAAATTCTGA 771 0.4034 MAMHRETWAFVFGLLGNIISFAVFLSPVPTFYIIFKKKSAEGFQSLPYVVALFSAMLWIYYAFVKREAALLLITINTFGIIVESAYLIIFLIYASKKSRLSTIKLLLLLNVFGFGAMLLSTLYLAKGAKRLAIIGWICLVFNISVFAAPLFVISKVIRTRSVEYMPFFLSFFLTINAVMWFFYGLLLKDYYVALPNTLGFVFGIIQMVIYLIYRNATPVLQAPLKGQELSGGHIIDVVKTGSEHNPGGGGGAVGKF 256
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g05757 256 PANTHER RAG1-ACTIVATING PROTEIN 1 14 217 IPR047664 -
Vivi5g05757 256 FunFam Bidirectional sugar transporter SWEET 10 99 - -
Vivi5g05757 256 Pfam Sugar efflux transporter for intercellular exchange 11 97 IPR004316 GO:0016020
Vivi5g05757 256 Pfam Sugar efflux transporter for intercellular exchange 133 216 IPR004316 GO:0016020
Vivi5g05757 256 Gene3D - 129 221 - -
Vivi5g05757 256 Gene3D - 11 99 - -
Vivi5g05757 256 FunFam Bidirectional sugar transporter SWEET 130 222 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g05757 Vivi-Chr5 161308474 161310594 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi5g05757 1 239 Miscellaneous Gene Families AT5G50800 58.750 1.23e-95 281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g05757 K15382 - gmx:100805676 409.838
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi5g05757 5 161308474 161310594 Vivi5g05757 5 161308474 161310594 ECH