Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g05732 ATGGGAAAAGATAACCAATTATCTGCTATGGAAGTTGATGATCCGAAATCAACCAGTTCTGATCAGATACTTCCCAAATTCTCTATTAATGTGCTGCAGCTTTTGAAATCAGCACAAATGCAGCATGGTTTGCGCCATGGAGATTACACTCGCTATCGGAGGTATTGCACAGCTCGGTTGAGGAGGTTGTATAAGTCTTTGAAGTTTACCCATGGTCGCGGCAAGTATGCGAAAAGAACCTTAACTGAGGCTAATGTCACAGAAGTAAGGTTTCTTCATGTGATTCTCTATTCGGCAGAAAGAGCTTGGAGTCATGCCATGGAGAAAAGGCAGCTTCCGAACGGACCAAATGCGTCTCAACGTATCTATCTGATTGGTAGGCTGCGGAAGGCAGTAAAGTGGGCCACTCTGTTTTCACAATTGTGTGCGTTAAAGGCAGATTCTAGAACATCTTTGGAAGCTGAGGCTTATGAGTCCTATATGAAGGGGAGTTTGTTGTTTGAGCAAGACCAGAATTGGGATGTGGCTTTAAAGCACTTCAAAAGTGCTAGGGCTGTATACGAGGAATTAGGGAAATATGGAGATCTGGATAACCAAGTTTTGTGTCGTGAGCGGGTTGAGGAACTAGAACCTAGTATCAGATACTGCCTTCATAAAATTGGCCAGTCAAATCTACAAACCTCTGAACTATTAAACATTGGTGATATGGAAGGTCCTGCATTAGACCTTTTTAAAGCTAAACTAGAGGCTGCCATGGCTGAGGCAAGATCTCAACAAGCTGCTTCCATGACAGAATTTAATTGGCTTGGCCATAGATTTCCAATATCAAATGCCAAAACAAGGGTTGCCATTTTGAAAGCCCAGGAGCTGGAGAAAGATATACACGGTCCCTTGGCAGAAAATATTTCCGCAGACAAAAGACTGGTTATTTTTGACAAAATCTTTTCCGCTTACCATGATGCTAGAGGATATATTCGGGCTGATTTGGCCACTGCAGGAAGTGCAGAAAGTGTGAAAGATGATTTGAATGGTCTTGATAAGGCTGTTAGTGCTGTCTTGGGAGAAAGAACCATTGAGCGCAACCTCTTGTTGGTCAAGATTGCAAAAAGTAAACTTGCAAAGCGTAATGATGATAAAAATGAAAAAGTCACCAAACCTGAAGAGCTTGTTCGCTTATATGATCTCTTGCTACAGAATACATCTGATCTATCTGATCTAGTCAGCTCTGGAAGGGACCAAAAGTCAGAAGAAGTTAGCTTTGCTGAAGAGTGTTCTTTCAAAAGTTTGGCTTTTCGAGCAGAAAGGTGCTTTTATGTTGCAAAATCGTACAGTGTGGCTGGAAAGAGGGCCGAAGCATATGCTTTGTACTGCCGTGCTCGCACTTTAGCTGAAGATGCCTTAAGAAAGCTTCAAAAATTAGATGGCAATAATAAGACTGTGATGAAAGAATTAGAGGTCTTGTGCAATGAAGCTCGCTCCAACAGTTGTATAGAACATGCATTGGGGATCATGGAAGAGAAAAAGACTCAAGAGAATATCTCCGAAGGAATCTCAAATATATCATTGACCGGAGCTGAGCGGTTGGAGAAGTTCCTATTAGAGAAACTTGATGTTTATGAGTCTGCTGTTGGTGATTCAAATGTGAAATCTGCACCGCGCATTGCACCCTTCCCCCCAGCTTTCCAGGCAATTGCCCGTAACCCTATTGTGCTGGACCTGGCGTATAACACTATCGAATTCCCAGATATTGATCACAGGATGAAGAAGGACAAAAGAGCAAAGGGCGGCTTTATAAGTAGAATATTTGGATGA 1812 0.4238 MGKDNQLSAMEVDDPKSTSSDQILPKFSINVLQLLKSAQMQHGLRHGDYTRYRRYCTARLRRLYKSLKFTHGRGKYAKRTLTEANVTEVRFLHVILYSAERAWSHAMEKRQLPNGPNASQRIYLIGRLRKAVKWATLFSQLCALKADSRTSLEAEAYESYMKGSLLFEQDQNWDVALKHFKSARAVYEELGKYGDLDNQVLCRERVEELEPSIRYCLHKIGQSNLQTSELLNIGDMEGPALDLFKAKLEAAMAEARSQQAASMTEFNWLGHRFPISNAKTRVAILKAQELEKDIHGPLAENISADKRLVIFDKIFSAYHDARGYIRADLATAGSAESVKDDLNGLDKAVSAVLGERTIERNLLLVKIAKSKLAKRNDDKNEKVTKPEELVRLYDLLLQNTSDLSDLVSSGRDQKSEEVSFAEECSFKSLAFRAERCFYVAKSYSVAGKRAEAYALYCRARTLAEDALRKLQKLDGNNKTVMKELEVLCNEARSNSCIEHALGIMEEKKTQENISEGISNISLTGAERLEKFLLEKLDVYESAVGDSNVKSAPRIAPFPPAFQAIARNPIVLDLAYNTIEFPDIDHRMKKDKRAKGGFISRIFG 603
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g05732 603 Coils Coil 463 483 - -
Vivi5g05732 603 FunFam Signal recognition particle subunit SRP68 26 223 - -
Vivi5g05732 603 MobiDBLite consensus disorder prediction 1 20 - -
Vivi5g05732 603 PANTHER SIGNAL RECOGNITION PARTICLE 68 KDA PROTEIN 19 602 IPR026258 GO:0005047|GO:0005786|GO:0006614|GO:0008312|GO:0030942
Vivi5g05732 603 Pfam RNA-binding signal recognition particle 68 44 578 IPR026258 GO:0005047|GO:0005786|GO:0006614|GO:0008312|GO:0030942
Vivi5g05732 603 CDD SRP68-RBD 30 218 IPR034652 GO:0003723
Vivi5g05732 603 Gene3D - 26 222 IPR038253 GO:0003723
Vivi5g05732 603 PIRSF SRP68 27 596 IPR026258 GO:0005047|GO:0005786|GO:0006614|GO:0008312|GO:0030942
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g05732 K03107 - gmx:100816486 1044.65
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi5g05732 5 160863784 160874169 Vivi5g05732 5 160863784 160874169 ECH