Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g05701 ATGAAAGGATCTCCTTCTGCAGATCTTCATCATCATGGACCAGATATAGAACTCATTGCCCCTGAAAACATCACAAAGTTAAGCAACTCTGTTGACGATAACAAAAAAGAAAAAGAAGAAGAAGCAGAAGACTATGTTGAGGTGACCATGGATATTCAAGGTGATTCTATTGCCTTACACAGTATGAAACCTATAATAGAAAGTGGCATGGAAGAAAGGGATGGTGAGAAACTGAGTTTGACTGGGAGGAGGTTGGAGCCGAAGAAATCTTTTGGTGCTTCAGTGGTTCAGAATGCTACTATTCGTATGAAGCAGCTGAAGCGTTTGACATCATTTGCGAAACCAGCAAAACGATTGGAAAGAACCAAGTCTGCAGTGGCTCATGCTCTCACTGGGCTCAAGTTTATCAGCTCGGCCGATGTTAGTGCAGGATGGAATAAAGTTGAGAAAGAGTTTGAAAAGCTTACTGCTACCACGGATGGATATCTTCCTCGCGCTCTCTTTGCTAAATGCATAGGATTGAATGCGGAGTCTGAGGCGTATGCAGAGAAGCTTTTTGATACTCTTGCTAGGCAGAGAGGTATTCAAGGTGGTTCAATTAACAAGATCCAGCTTAGGGAGTTTTGGGACTGTATTTCTGACCAGAGCTTTGACACTAGGCTCAAAACATTCTTTGACATGGTTGACAAAGATGCAGATGGAAGAATCACTGAGGAGGAGATAAAAGATATCATATGTCTGAGCGCCACTGCGAACAAACTCTCAAACATCCAGAAGCAAGCGGAGGAATATGCGGCTTTGATCATGGAAGAACTAGATCCGGATGACACGGGATATATTTTGATAGGGAATCTGGAGACTCTCTTATTGCACGTACCAGAAGAAAATACAAGGGGAGAAAGTGAGAACATGAGCAAAGCGATAAGCCAAAAGCTTAAGCCTATATTTGAGGAAAATCCTATTAAGAGGTGGTATAGAGATACTAAGTACTTCTTCCAGGATAACTGGCGAAGATCTTGGGTGTTTGCGCTGTGGATTGTTGTGATGTTAGGTCTATTTGCCTATAAATTTGTGCAATATAGAAGAAGAGCTGCATATGAAGTGATGGGGCATTGTGTGTGCATGGCAAAAGGTGCTGCTGAAACGCTTAAGTTGAACATGGCTATTATCTTATTGCCTGTTTGCCGAAACACCATCACTTGGCTCAGGAATAAGACCAAGCTAGGCGCTTTTGTTCCCTTTGACGACAGTATCAACTTTCACAAGATGATAGCTATGGCAATATCACTTGGTGTTGGGATTCATGCTATTTATCATCTTGTTTGTGATTTTCCTCGTCTTCTTCATGCAAGCAATGAAAAGTACAAGCTGATGGAGCCCTTTTTCGGACATAAACCATCGAATTACTGGTATTTTGTCAAATCATGGGAAGGAGTAACAGGGATTCTAATGGTTGTGATAATGGCAATATCCTTTACACTGGCCAATACTACGTTCAGGAGGAATCGTACCAAACTACCTAAACCCTTTAACAAACTCACAGGTTTCAATGCCTTTTGGTATTCTCATCACCTCTTCATCATTGTCTATGCCCTCTTGATCATCCACGGAACCAAACTTTACCTAACTAAAGAATGGTACAAGAAAACGACTTGGATGTATCTGGCAATTCCCATCACCATTTATGCATTGGAAAGGCTCATTAGAGCACTTAGATCGAGCATCAAATCGGTGAAAATATTGAAGGTTGCTGTTTATCCTGGAAATGTGTTGACAATTAATATGTCAAAGCCTCAAGGGTTTAGCTATAAGAGTGGACAATACATGCTTGTCAATTGTGCTGCTGTGTCTCCACTAGAATGGCATCCATTTTCTATAACTTCTGCTCCTAATGATGATTACCTTAGCGTTCACATTAAAACAGTTGGGGATTGGACTGGAGGTCTGAAAAAAAAATTCACAGAGGCGTGCAAGCTAGCCAACAAAGGACAGAGTGGACTTCCAAGAGGAGAATGTTTGGAGGGAGATAACAGCCCAAGCATTTTCCCTAAAGTTTTGATTGATGGTCCGTATGGAGCGCCAGCACAAGACTACAGGGAGTATGAAGTGGTTTTACTAGTGGGGTTAGGAATAGGAGCTACCCCAATGATAAGTATACTAAAGGACATGGTCAATAATTTCAAAGCCATGGAAGAGGAAGAAGGGTTTGCAATGGAGGAAGGATCACCAGTGACAAGCAATCAGAAAGACACTAGGTTCAGTGACTTCAAGACAAGAAGGGCATACTTCTATTGGGTGACAAGAGAGCAAGGTTCCTTTGATTGGTTTAAAGGGGTGATGAATGACGTAGCTGAGGAGGACAGAGGGGGATTGATTGAGCTGCACAGCTACTGCACCAGCGTATACGAGCAGGGTGATGCTCGCTCTGCTCTTATTGCTATGGTGCAGTCTATAAGCCATGCAAAAAATGGTTATGACGTTGTGTCGGGCACTCGCGTCAAGTCTCACTTTGCCAAACCCAACTGGCGAGCTGTTTACAAACGCATTGCACTTAATCACCCTGAAGCACGCGTTGGGGTATTTTACTGTGGGCCATCATCCCTGACTGACGAGCTTCGCCAGCTATCATTGGATTTCTCTCACAATACATCCACCAAATTCGACTTTCATAAAGAAAATTTCTGA 2685 0.4257 MKGSPSADLHHHGPDIELIAPENITKLSNSVDDNKKEKEEEAEDYVEVTMDIQGDSIALHSMKPIIESGMEERDGEKLSLTGRRLEPKKSFGASVVQNATIRMKQLKRLTSFAKPAKRLERTKSAVAHALTGLKFISSADVSAGWNKVEKEFEKLTATTDGYLPRALFAKCIGLNAESEAYAEKLFDTLARQRGIQGGSINKIQLREFWDCISDQSFDTRLKTFFDMVDKDADGRITEEEIKDIICLSATANKLSNIQKQAEEYAALIMEELDPDDTGYILIGNLETLLLHVPEENTRGESENMSKAISQKLKPIFEENPIKRWYRDTKYFFQDNWRRSWVFALWIVVMLGLFAYKFVQYRRRAAYEVMGHCVCMAKGAAETLKLNMAIILLPVCRNTITWLRNKTKLGAFVPFDDSINFHKMIAMAISLGVGIHAIYHLVCDFPRLLHASNEKYKLMEPFFGHKPSNYWYFVKSWEGVTGILMVVIMAISFTLANTTFRRNRTKLPKPFNKLTGFNAFWYSHHLFIIVYALLIIHGTKLYLTKEWYKKTTWMYLAIPITIYALERLIRALRSSIKSVKILKVAVYPGNVLTINMSKPQGFSYKSGQYMLVNCAAVSPLEWHPFSITSAPNDDYLSVHIKTVGDWTGGLKKKFTEACKLANKGQSGLPRGECLEGDNSPSIFPKVLIDGPYGAPAQDYREYEVVLLVGLGIGATPMISILKDMVNNFKAMEEEEGFAMEEGSPVTSNQKDTRFSDFKTRRAYFYWVTREQGSFDWFKGVMNDVAEEDRGGLIELHSYCTSVYEQGDARSALIAMVQSISHAKNGYDVVSGTRVKSHFAKPNWRAVYKRIALNHPEARVGVFYCGPSSLTDELRQLSLDFSHNTSTKFDFHKENF 894
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g05701 894 Pfam Ferric reductase like transmembrane component 378 534 IPR013130 -
Vivi5g05701 894 SUPERFAMILY Riboflavin synthase domain-like 577 693 IPR017938 -
Vivi5g05701 894 Gene3D - 119 237 - -
Vivi5g05701 894 FunFam Respiratory burst oxidase homolog A 119 237 - -
Vivi5g05701 894 SFLD NADPH oxidase subgroup (NOX) 97 894 - -
Vivi5g05701 894 MobiDBLite consensus disorder prediction 1 17 - -
Vivi5g05701 894 ProSiteProfiles Ferredoxin reductase-type FAD binding domain profile. 573 697 IPR017927 GO:0016491
Vivi5g05701 894 ProSitePatterns EF-hand calcium-binding domain. 229 241 IPR018247 -
Vivi5g05701 894 PRINTS Cytochrome B-245 heavy chain signature 706 723 IPR000778 GO:0016020|GO:0016491
Vivi5g05701 894 PRINTS Cytochrome B-245 heavy chain signature 683 696 IPR000778 GO:0016020|GO:0016491
Vivi5g05701 894 PRINTS Cytochrome B-245 heavy chain signature 516 536 IPR000778 GO:0016020|GO:0016491
Vivi5g05701 894 PRINTS Cytochrome B-245 heavy chain signature 424 442 IPR000778 GO:0016020|GO:0016491
Vivi5g05701 894 CDD NOX_Duox_like_FAD_NADP 580 894 - -
Vivi5g05701 894 SUPERFAMILY EF-hand 146 293 IPR011992 -
Vivi5g05701 894 CDD EFh 198 245 IPR002048 GO:0005509
Vivi5g05701 894 MobiDBLite consensus disorder prediction 1 41 - -
Vivi5g05701 894 ProSiteProfiles EF-hand calcium-binding domain profile. 216 251 IPR002048 GO:0005509
Vivi5g05701 894 PANTHER NADPH OXIDASE 181 894 - -
Vivi5g05701 894 FunFam Respiratory burst oxidase protein A 692 894 - -
Vivi5g05701 894 Pfam Ferric reductase NAD binding domain 701 876 IPR013121 GO:0016491
Vivi5g05701 894 FunFam Respiratory burst oxidase homolog A 564 656 - -
Vivi5g05701 894 Pfam FAD-binding domain 576 694 IPR013112 GO:0016491
Vivi5g05701 894 SUPERFAMILY Ferredoxin reductase-like, C-terminal NADP-linked domain 699 894 IPR039261 -
Vivi5g05701 894 Gene3D - 692 894 IPR039261 -
Vivi5g05701 894 Gene3D Translation factors 564 665 - -
Vivi5g05701 894 Pfam Respiratory burst NADPH oxidase 118 219 IPR013623 GO:0004601|GO:0050664
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g05701 Vivi-Chr5 160532106 160537590 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi5g05701 7 894 Miscellaneous Gene Families AT5G51060 60.465 0.0 1119
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g05701 K13447 - gmx:100808271 1420.99
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi5g05701 5 160532106 160537590 Vivi5g05701 5 160532106 160537590 ECH